Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm38062-201ENSMUST00000192541 1856 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Nkx3-1P97436 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm7309-201ENSMUST00000121670 581 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Ear-ps5-201ENSMUST00000164700 463 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Mir6903-201ENSMUST00000183597 88 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm27355-201ENSMUST00000185045 128 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm29284-201ENSMUST00000188363 255 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm29376-201ENSMUST00000189357 835 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm28507-201ENSMUST00000189737 703 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm8826-201ENSMUST00000193161 948 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm43724-201ENSMUST00000197516 226 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm44053-201ENSMUST00000203364 929 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm4874-201ENSMUST00000203589 691 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 AC154417.1-201ENSMUST00000223876 476 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 AC091783.2-201ENSMUST00000224626 740 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm44735-201ENSMUST00000206197 1752 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm18757-201ENSMUST00000207938 3141 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC4.98□□□□□ -1.61
Nkx3-1P97436 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Nkx3-1P97436 AC122357.3-201ENSMUST00000221260 2293 ntBASIC4.98□□□□□ -1.61
Nkx3-1P97436 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Nkx3-1P97436 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm8979-201ENSMUST00000183386 7296 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm15425-201ENSMUST00000119013 2711 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Nkx3-1P97436 AC130827.1-201ENSMUST00000220476 3850 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm37429-201ENSMUST00000193807 1799 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm14520-201ENSMUST00000119258 387 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm22214-201ENSMUST00000157563 172 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm24692-201ENSMUST00000157761 146 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm24940-201ENSMUST00000158326 108 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Mir3090-201ENSMUST00000175597 87 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm37491-201ENSMUST00000192552 1111 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm42646-201ENSMUST00000202233 914 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm45156-201ENSMUST00000207255 439 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm44683-201ENSMUST00000209088 484 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm18591-201ENSMUST00000220568 763 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx3-1P97436 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx3-1P97436 AC154636.1-201ENSMUST00000223226 126 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm17165-201ENSMUST00000096155 493 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Nkx3-1P97436 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm42440-201ENSMUST00000197906 2284 ntBASIC4.97□□□□□ -1.61
Nkx3-1P97436 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Nkx3-1P97436 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Nkx3-1P97436 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Nkx3-1P97436 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms