Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm22284-201ENSMUST00000104132 132 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Gm15332-201ENSMUST00000118386 357 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Gm13506-201ENSMUST00000120391 1083 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Gm11200-201ENSMUST00000121698 448 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm25227-201ENSMUST00000158204 112 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Gm8919-201ENSMUST00000182028 1014 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm19182-201ENSMUST00000207139 577 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Gm31166-201ENSMUST00000209326 288 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.18□□□□□ -1.42
Tpm1P58771 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Tpm1P58771 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Tpm1P58771 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm23502-201ENSMUST00000083902 145 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Gm24032-201ENSMUST00000083932 159 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Tpm1P58771 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm12633-201ENSMUST00000117742 1705 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Tpm1P58771 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Gm6645-201ENSMUST00000118505 2726 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Tpm1P58771 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Tpm1P58771 Gm43462-201ENSMUST00000200265 3648 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Tpm1P58771 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.17□□□□□ -1.42
Tpm1P58771 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Tpm1P58771 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Tpm1P58771 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Tpm1P58771 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Tpm1P58771 Gm11271-201ENSMUST00000116054 440 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 Gm12683-201ENSMUST00000117528 415 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 Gm13176-201ENSMUST00000117910 477 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Tpm1P58771 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Tpm1P58771 Gm12504-202ENSMUST00000148026 306 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Tpm1P58771 Gm9006-201ENSMUST00000165520 841 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 Gm22642-201ENSMUST00000175352 252 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 Gm42886-201ENSMUST00000199214 466 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.17□□□□□ -1.42
Tpm1P58771 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Tpm1P58771 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 Gm19136-201ENSMUST00000190706 2067 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Tpm1P58771 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Tpm1P58771 AC116797.2-201ENSMUST00000224763 4221 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Tpm1P58771 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Tpm1P58771 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Tpm1P58771 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Tpm1P58771 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Tpm1P58771 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Tpm1P58771 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.17□□□□□ -1.42
Tpm1P58771 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Tpm1P58771 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC6.16□□□□□ -1.42
Tpm1P58771 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
Tpm1P58771 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Tpm1P58771 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Tpm1P58771 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
Tpm1P58771 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Tpm1P58771 Snora35-201ENSMUST00000104579 128 ntBASIC6.16□□□□□ -1.42
Tpm1P58771 Gm12439-201ENSMUST00000117162 365 ntBASIC6.16□□□□□ -1.42
Tpm1P58771 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.16□□□□□ -1.42
Tpm1P58771 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Tpm1P58771 Gm25846-201ENSMUST00000158013 135 ntBASIC6.16□□□□□ -1.42
Tpm1P58771 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.16□□□□□ -1.42
Tpm1P58771 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.16□□□□□ -1.42
Tpm1P58771 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Tpm1P58771 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Tpm1P58771 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Tpm1P58771 Gm4870-201ENSMUST00000198525 1251 ntBASIC6.16□□□□□ -1.42
Tpm1P58771 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Tpm1P58771 Gm42961-201ENSMUST00000202023 181 ntBASIC6.16□□□□□ -1.42
Tpm1P58771 Gm42646-201ENSMUST00000202233 914 ntBASIC6.16□□□□□ -1.42
Tpm1P58771 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Tpm1P58771 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.16□□□□□ -1.42
Tpm1P58771 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms