Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rfx3P48381 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rfx3P48381 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Rfx3P48381 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rfx3P48381 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Mir546-201ENSMUST00000102105 121 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Gm22371-201ENSMUST00000104588 130 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Gm14716-201ENSMUST00000120138 718 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Gm12488-201ENSMUST00000122449 499 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.13□□□□□ -1.59
Rfx3P48381 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm23995-201ENSMUST00000158060 129 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Gm23050-201ENSMUST00000158775 165 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Gm24733-201ENSMUST00000158863 253 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Gm3076-201ENSMUST00000161613 451 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm26057-201ENSMUST00000178099 165 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Gm3650-201ENSMUST00000180600 747 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Vis1-201ENSMUST00000183957 201 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm44091-201ENSMUST00000205212 649 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm7499-201ENSMUST00000210423 813 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Gm8523-201ENSMUST00000211386 552 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.13□□□□□ -1.59
Rfx3P48381 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.13□□□□□ -1.59
Rfx3P48381 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.13□□□□□ -1.59
Rfx3P48381 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 AC137871.3-201ENSMUST00000226628 225 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Rfx3P48381 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Rfx3P48381 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Rfx3P48381 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm23502-201ENSMUST00000083902 145 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm9519-201ENSMUST00000206108 1337 ntBASIC5.13□□□□□ -1.59
Rfx3P48381 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Rfx3P48381 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rfx3P48381 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Rfx3P48381 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rfx3P48381 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rfx3P48381 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rfx3P48381 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rfx3P48381 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Rfx3P48381 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rfx3P48381 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rfx3P48381 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rfx3P48381 Gm22499-201ENSMUST00000104501 135 ntBASIC5.12□□□□□ -1.59
Rfx3P48381 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.12□□□□□ -1.59
Rfx3P48381 Gm15781-201ENSMUST00000120216 323 ntBASIC5.12□□□□□ -1.59
Rfx3P48381 Gm14563-201ENSMUST00000120571 354 ntBASIC5.12□□□□□ -1.59
Rfx3P48381 Gm12890-201ENSMUST00000120885 373 ntBASIC5.12□□□□□ -1.59
Rfx3P48381 Gm11761-201ENSMUST00000121392 445 ntBASIC5.12□□□□□ -1.59
Rfx3P48381 Gm11679-201ENSMUST00000121830 779 ntBASIC5.12□□□□□ -1.59
Rfx3P48381 Gm22518-201ENSMUST00000158267 68 ntBASIC5.12□□□□□ -1.59
Rfx3P48381 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Rfx3P48381 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms