Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC7.72□□□□□ -1.17
Rfx1P48377 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Rfx1P48377 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm8837-201ENSMUST00000161037 1107 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm3339-201ENSMUST00000163462 475 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Rfx1P48377 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm23810-201ENSMUST00000175150 74 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm23018-201ENSMUST00000177928 109 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm9457-201ENSMUST00000180176 372 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm29281-201ENSMUST00000188077 381 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm18775-201ENSMUST00000190763 586 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm5853-201ENSMUST00000197183 632 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC7.72□□□□□ -1.17
Rfx1P48377 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm45189-201ENSMUST00000208567 363 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm45319-201ENSMUST00000210220 318 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 AC154851.1-201ENSMUST00000221591 655 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm9293-201ENSMUST00000223096 306 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 AC117814.1-201ENSMUST00000226135 352 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 CT009600.2-201ENSMUST00000226638 481 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 CT030662.1-201ENSMUST00000227380 232 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm10115-201ENSMUST00000076071 1228 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm25852-201ENSMUST00000082790 130 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm23452-201ENSMUST00000083327 107 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 n-R5s27-201ENSMUST00000093699 119 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rfx1P48377 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rfx1P48377 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rfx1P48377 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC7.72□□□□□ -1.17
Rfx1P48377 AC139754.2-201ENSMUST00000218037 1455 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rfx1P48377 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Rfx1P48377 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Rfx1P48377 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rfx1P48377 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.71□□□□□ -1.17
Rfx1P48377 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Rfx1P48377 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC7.71□□□□□ -1.17
Rfx1P48377 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Rfx1P48377 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.17
Rfx1P48377 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Rfx1P48377 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Rfx1P48377 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm14606-201ENSMUST00000117078 1155 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Gm15621-201ENSMUST00000119162 364 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Gm11517-201ENSMUST00000119491 387 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Gm11484-201ENSMUST00000119808 338 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Gm12734-201ENSMUST00000120228 948 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Gm12518-201ENSMUST00000122075 779 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.71□□□□□ -1.18
Rfx1P48377 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Rfx1P48377 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Gm25640-201ENSMUST00000175378 125 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Rfx1P48377 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Mir6348-201ENSMUST00000183804 120 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Gm27636-201ENSMUST00000184528 122 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm42938-201ENSMUST00000198414 1072 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.71□□□□□ -1.18
Rfx1P48377 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC7.71□□□□□ -1.18
Rfx1P48377 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm18645-201ENSMUST00000209593 651 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC7.71□□□□□ -1.18
Rfx1P48377 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Rfx1P48377 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.71□□□□□ -1.18
Rfx1P48377 AC174776.1-201ENSMUST00000221509 405 ntBASIC7.71□□□□□ -1.18
Rfx1P48377 Gm19011-201ENSMUST00000221777 808 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms