Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm24802-201ENSMUST00000178897 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm25208-201ENSMUST00000178964 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm24567-201ENSMUST00000179294 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm23943-201ENSMUST00000179712 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm25228-201ENSMUST00000180121 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm23304-201ENSMUST00000180209 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC5.73□□□□□ -1.49
HttP42859 Gm28769-201ENSMUST00000190176 615 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.73□□□□□ -1.49
HttP42859 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.73□□□□□ -1.49
HttP42859 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HttP42859 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HttP42859 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HttP42859 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HttP42859 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HttP42859 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
HttP42859 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.73□□□□□ -1.49
HttP42859 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HttP42859 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC5.72□□□□□ -1.49
HttP42859 Gm14304-201ENSMUST00000117272 446 ntBASIC5.72□□□□□ -1.49
HttP42859 Gm14382-201ENSMUST00000117374 437 ntBASIC5.72□□□□□ -1.49
HttP42859 Gm15357-201ENSMUST00000119160 285 ntBASIC5.72□□□□□ -1.49
HttP42859 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.72□□□□□ -1.49
HttP42859 Gm22792-201ENSMUST00000157225 133 ntBASIC5.72□□□□□ -1.49
HttP42859 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HttP42859 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HttP42859 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.72□□□□□ -1.49
HttP42859 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.72□□□□□ -1.49
HttP42859 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.72□□□□□ -1.49
HttP42859 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC5.72□□□□□ -1.49
HttP42859 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HttP42859 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Snord22-201ENSMUST00000083153 126 ntBASIC5.72□□□□□ -1.49
HttP42859 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HttP42859 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.72□□□□□ -1.49
HttP42859 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HttP42859 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HttP42859 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
HttP42859 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HttP42859 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
HttP42859 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.72□□□□□ -1.49
HttP42859 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.72□□□□□ -1.49
HttP42859 Gm25291-201ENSMUST00000122795 144 ntBASIC5.72□□□□□ -1.49
HttP42859 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.72□□□□□ -1.49
HttP42859 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HttP42859 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HttP42859 Gm27308-201ENSMUST00000184807 233 ntBASIC5.72□□□□□ -1.49
HttP42859 Gm37167-201ENSMUST00000194946 396 ntBASIC5.72□□□□□ -1.49
HttP42859 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.72□□□□□ -1.49
HttP42859 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HttP42859 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
HttP42859 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HttP42859 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.72□□□□□ -1.49
HttP42859 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HttP42859 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HttP42859 Gm7093-201ENSMUST00000223004 581 ntBASIC5.72□□□□□ -1.49
HttP42859 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.72□□□□□ -1.49
HttP42859 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.72□□□□□ -1.49
HttP42859 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC5.72□□□□□ -1.49
HttP42859 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.71□□□□□ -1.49
HttP42859 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HttP42859 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.71□□□□□ -1.49
HttP42859 Diaph1-203ENSMUST00000115629 5416 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
HttP42859 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC5.71□□□□□ -1.49
HttP42859 Gm14756-201ENSMUST00000116395 240 ntBASIC5.71□□□□□ -1.5
HttP42859 Gm25103-201ENSMUST00000122671 318 ntBASIC5.71□□□□□ -1.5
HttP42859 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.71□□□□□ -1.5
HttP42859 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HttP42859 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.71□□□□□ -1.5
HttP42859 Gm7721-201ENSMUST00000200446 546 ntBASIC5.71□□□□□ -1.5
HttP42859 Gm19096-201ENSMUST00000209705 766 ntBASIC5.71□□□□□ -1.5
HttP42859 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HttP42859 Gm43769-201ENSMUST00000201871 4323 ntBASIC5.71□□□□□ -1.5
HttP42859 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HttP42859 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
HttP42859 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.71□□□□□ -1.5
HttP42859 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HttP42859 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HttP42859 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HttP42859 AC093022.3-201ENSMUST00000226569 1926 ntBASIC5.71□□□□□ -1.5
HttP42859 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms