Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp4P35123 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Usp4P35123 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Usp4P35123 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp4P35123 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Usp4P35123 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Usp4P35123 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp4P35123 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Usp4P35123 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Usp4P35123 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp4P35123 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp4P35123 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Usp4P35123 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp4P35123 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Usp4P35123 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC6.57□□□□□ -1.36
Usp4P35123 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Usp4P35123 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Usp4P35123 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 Gm15125-201ENSMUST00000116185 800 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm12090-201ENSMUST00000118692 758 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm13359-201ENSMUST00000119000 695 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm2199-201ENSMUST00000119065 874 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm13357-201ENSMUST00000120528 537 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm9001-201ENSMUST00000121642 399 ntBASIC6.57□□□□□ -1.36
Usp4P35123 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 Gm24768-201ENSMUST00000158512 94 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm17377-201ENSMUST00000165184 207 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp4P35123 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Usp4P35123 Gm24465-201ENSMUST00000178398 107 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm10410-201ENSMUST00000180138 384 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.57□□□□□ -1.36
Usp4P35123 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 Gm26898-201ENSMUST00000181678 384 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm8614-201ENSMUST00000182528 978 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm19200-201ENSMUST00000182579 1001 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp4P35123 Gm27299-201ENSMUST00000184593 103 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm27219-201ENSMUST00000184633 742 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm20561-201ENSMUST00000188131 292 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm28620-201ENSMUST00000190463 439 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm37477-201ENSMUST00000195215 884 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm29778-201ENSMUST00000201667 466 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.57□□□□□ -1.36
Usp4P35123 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp4P35123 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC6.57□□□□□ -1.36
Usp4P35123 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm17994-201ENSMUST00000209260 533 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm7769-201ENSMUST00000212900 933 ntBASIC6.57□□□□□ -1.36
Usp4P35123 AC154296.3-201ENSMUST00000214427 712 ntBASIC6.57□□□□□ -1.36
Usp4P35123 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp4P35123 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.57□□□□□ -1.36
Usp4P35123 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.57□□□□□ -1.36
Usp4P35123 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.57□□□□□ -1.36
Usp4P35123 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC6.57□□□□□ -1.36
Usp4P35123 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC6.57□□□□□ -1.36
Usp4P35123 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.57□□□□□ -1.36
Usp4P35123 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Usp4P35123 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Usp4P35123 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Usp4P35123 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Usp4P35123 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp4P35123 Gm44800-201ENSMUST00000207510 1855 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
Usp4P35123 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp4P35123 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Usp4P35123 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Usp4P35123 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Usp4P35123 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.57□□□□□ -1.36
Usp4P35123 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp4P35123 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.56□□□□□ -1.36
Usp4P35123 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Usp4P35123 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Usp4P35123 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.56□□□□□ -1.36
Usp4P35123 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Usp4P35123 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Usp4P35123 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.56□□□□□ -1.36
Usp4P35123 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.56□□□□□ -1.36
Usp4P35123 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms