Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.86□□□□□ -1.47
Hoxa9P09631 Gm13887-201ENSMUST00000119009 344 ntBASIC5.86□□□□□ -1.47
Hoxa9P09631 Gm14679-201ENSMUST00000121536 722 ntBASIC5.86□□□□□ -1.47
Hoxa9P09631 Gm25227-201ENSMUST00000158204 112 ntBASIC5.86□□□□□ -1.47
Hoxa9P09631 Gm18953-201ENSMUST00000175694 300 ntBASIC5.86□□□□□ -1.47
Hoxa9P09631 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Hoxa9P09631 Gm26738-201ENSMUST00000181312 601 ntBASIC5.86□□□□□ -1.47
Hoxa9P09631 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxa9P09631 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Hoxa9P09631 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxa9P09631 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.86□□□□□ -1.47
Hoxa9P09631 Gm7733-201ENSMUST00000199038 919 ntBASIC5.86□□□□□ -1.47
Hoxa9P09631 Gm44053-201ENSMUST00000203364 929 ntBASIC5.86□□□□□ -1.47
Hoxa9P09631 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
Hoxa9P09631 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.86□□□□□ -1.47
Hoxa9P09631 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.86□□□□□ -1.47
Hoxa9P09631 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxa9P09631 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxa9P09631 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxa9P09631 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxa9P09631 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Hoxa9P09631 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxa9P09631 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.86□□□□□ -1.47
Hoxa9P09631 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.86□□□□□ -1.47
Hoxa9P09631 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.86□□□□□ -1.47
Hoxa9P09631 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Hoxa9P09631 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Hoxa9P09631 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxa9P09631 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Hoxa9P09631 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxa9P09631 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Hoxa9P09631 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxa9P09631 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxa9P09631 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.85□□□□□ -1.47
Hoxa9P09631 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Hoxa9P09631 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Hoxa9P09631 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Gm11990-201ENSMUST00000121505 897 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Gm15877-201ENSMUST00000121897 964 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Gm24216-201ENSMUST00000158259 117 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Mir3080-201ENSMUST00000175010 79 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Mir5128-201ENSMUST00000175217 84 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Gm22119-201ENSMUST00000175594 99 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC5.85□□□□□ -1.47
Hoxa9P09631 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.85□□□□□ -1.47
Hoxa9P09631 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Gm7832-201ENSMUST00000202613 880 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Gm8523-201ENSMUST00000211386 552 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.85□□□□□ -1.47
Hoxa9P09631 Gm18705-201ENSMUST00000215985 913 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Gm18940-201ENSMUST00000222518 871 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxa9P09631 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxa9P09631 Mir331-201ENSMUST00000083673 96 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxa9P09631 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxa9P09631 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxa9P09631 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.85□□□□□ -1.47
Hoxa9P09631 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.85□□□□□ -1.47
Hoxa9P09631 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.84□□□□□ -1.47
Hoxa9P09631 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxa9P09631 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxa9P09631 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.84□□□□□ -1.47
Hoxa9P09631 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxa9P09631 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm24886-201ENSMUST00000104384 123 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm14836-201ENSMUST00000118567 471 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm14998-201ENSMUST00000120502 495 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.84□□□□□ -1.47
Hoxa9P09631 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm22852-201ENSMUST00000177899 101 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm29124-201ENSMUST00000186576 452 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm28195-201ENSMUST00000186992 372 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm28149-201ENSMUST00000187102 378 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm28768-201ENSMUST00000189034 378 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm18352-201ENSMUST00000189113 902 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm4322-201ENSMUST00000191094 336 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm37024-201ENSMUST00000192224 868 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm2429-201ENSMUST00000194635 586 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm18702-201ENSMUST00000196923 588 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm43148-201ENSMUST00000198237 520 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm44108-201ENSMUST00000203525 422 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm44683-201ENSMUST00000209088 484 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.84□□□□□ -1.47
Hoxa9P09631 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms