Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC5.94□□□□□ -1.46
Hoxd3P09027 CT009515.4-201ENSMUST00000228165 1494 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm43254-201ENSMUST00000199187 2491 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm45634-201ENSMUST00000209736 1990 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm11282-201ENSMUST00000119018 1416 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm22439-201ENSMUST00000104048 132 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Mir669e-201ENSMUST00000117003 119 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm13526-201ENSMUST00000117970 189 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm12155-201ENSMUST00000121267 160 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm13828-201ENSMUST00000122278 363 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Defa-ps12-201ENSMUST00000122353 193 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC5.93□□□□□ -1.46
Hoxd3P09027 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm17149-201ENSMUST00000164712 375 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Mir5100-201ENSMUST00000174993 64 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm24561-201ENSMUST00000175182 95 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm26505-201ENSMUST00000176208 166 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm29045-201ENSMUST00000187278 698 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm28069-201ENSMUST00000189926 214 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm29562-201ENSMUST00000190113 904 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm38008-201ENSMUST00000195333 518 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm2142-201ENSMUST00000197899 589 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm45042-201ENSMUST00000207377 211 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm44853-201ENSMUST00000209070 250 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm8575-201ENSMUST00000210262 521 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC5.93□□□□□ -1.46
Hoxd3P09027 AC153141.1-201ENSMUST00000218636 501 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm45925-202ENSMUST00000219904 1136 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 AC139941.1-201ENSMUST00000221517 478 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC5.93□□□□□ -1.46
Hoxd3P09027 AC154785.1-201ENSMUST00000223280 572 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 AL590616.1-201ENSMUST00000223339 574 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm22265-201ENSMUST00000082947 116 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Hoxd3P09027 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC5.93□□□□□ -1.46
Hoxd3P09027 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Hoxd3P09027 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm45358-201ENSMUST00000209492 2305 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Gm10258-201ENSMUST00000091270 2123 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.93□□□□□ -1.46
Hoxd3P09027 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hoxd3P09027 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Hoxd3P09027 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms