Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm26165-201ENSMUST00000083791 138 ntBASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gm7946-201ENSMUST00000203326 958 ntBASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gm44673-201ENSMUST00000205692 996 ntBASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col6a3E9PWQ3 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Gm24987-201ENSMUST00000104453 134 ntBASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Gm16007-201ENSMUST00000117837 286 ntBASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Gm20428-201ENSMUST00000174365 283 ntBASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Gm2914-201ENSMUST00000186120 328 ntBASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Gm6362-201ENSMUST00000217686 836 ntBASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Gm5341-201ENSMUST00000058881 489 ntBASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a3E9PWQ3 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Gm11584-201ENSMUST00000120636 325 ntBASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Gm28097-201ENSMUST00000187333 366 ntBASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Igkv11-118-201ENSMUST00000199448 346 ntBASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Gm21036-201ENSMUST00000207544 2611 ntBASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 AC118639.1-203ENSMUST00000228425 2016 ntBASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Gm14933-201ENSMUST00000118840 481 ntBASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Gm26219-201ENSMUST00000175216 71 ntBASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms