Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm24706-201ENSMUST00000082806 137 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm23238-201ENSMUST00000083007 164 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Mir484-201ENSMUST00000093566 67 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a4A2AX52 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm42874-201ENSMUST00000198888 1774 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a4A2AX52 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a4A2AX52 AC130217.2-201ENSMUST00000224009 2990 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm37773-201ENSMUST00000194141 2120 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm44039-201ENSMUST00000204192 2246 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col6a4A2AX52 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm24767-201ENSMUST00000158509 95 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm4831-201ENSMUST00000174626 594 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm23164-201ENSMUST00000175084 111 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm22411-201ENSMUST00000175462 126 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm22002-201ENSMUST00000175622 125 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm2531-201ENSMUST00000075609 512 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col6a4A2AX52 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm42503-201ENSMUST00000199080 3706 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a4A2AX52 AC159244.3-201ENSMUST00000222887 3153 ntBASIC4.76□□□□□ -1.65
Col6a4A2AX52 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Col6a4A2AX52 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm17223-201ENSMUST00000171413 481 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Mir6400-201ENSMUST00000184870 92 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm18468-201ENSMUST00000207321 369 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm18470-201ENSMUST00000207467 420 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm18465-201ENSMUST00000207468 369 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm18464-201ENSMUST00000207803 420 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm18458-201ENSMUST00000207908 369 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm18461-201ENSMUST00000208421 420 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm8523-201ENSMUST00000211386 552 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm24029-201ENSMUST00000083928 143 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm38224-201ENSMUST00000191648 2100 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 AC164297.2-201ENSMUST00000224388 1508 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 AC158595.1-201ENSMUST00000217989 1435 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm6175-201ENSMUST00000121351 400 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm37421-201ENSMUST00000193088 132 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm37341-201ENSMUST00000194680 371 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm43408-201ENSMUST00000198263 440 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 AC153505.2-201ENSMUST00000217741 277 ntBASIC4.75□□□□□ -1.65
Col6a4A2AX52 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms