Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm11679-201ENSMUST00000121830 779 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm23883-201ENSMUST00000122686 290 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm20519-201ENSMUST00000173684 359 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm23631-201ENSMUST00000175291 123 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm26970-201ENSMUST00000182990 964 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm28683-201ENSMUST00000187134 615 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm28840-205ENSMUST00000189320 615 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm28835-203ENSMUST00000190062 615 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm18036-201ENSMUST00000195256 272 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm44184-201ENSMUST00000204290 132 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Gm23250-201ENSMUST00000157444 267 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 AC155808.1-201ENSMUST00000219288 409 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Gm23750-201ENSMUST00000104222 132 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Gm7609-204ENSMUST00000161424 461 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Gm2914-201ENSMUST00000186120 328 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Gm37421-201ENSMUST00000193088 132 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Gm42437-201ENSMUST00000197263 923 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Gm17992-201ENSMUST00000207346 1072 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC6.25□□□□□ -1.41
Scn3aA2ASI5 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Gm6474-201ENSMUST00000223250 699 ntBASIC6.25□□□□□ -1.41
Scn3aA2ASI5 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scn3aA2ASI5 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
Scn3aA2ASI5 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.24□□□□□ -1.41
Scn3aA2ASI5 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC6.24□□□□□ -1.41
Scn3aA2ASI5 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scn3aA2ASI5 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Scn3aA2ASI5 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scn3aA2ASI5 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scn3aA2ASI5 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.24□□□□□ -1.41
Scn3aA2ASI5 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scn3aA2ASI5 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms