Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1aA2APX8 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1aA2APX8 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1aA2APX8 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1aA2APX8 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1aA2APX8 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1aA2APX8 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1aA2APX8 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.86□□□□□ -1.47
Scn1aA2APX8 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1aA2APX8 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.86□□□□□ -1.47
Scn1aA2APX8 AV026068-231ENSMUST00000225862 482 ntBASIC5.86□□□□□ -1.47
Scn1aA2APX8 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Scn1aA2APX8 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.86□□□□□ -1.47
Scn1aA2APX8 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Scn1aA2APX8 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1aA2APX8 Gm25682-201ENSMUST00000083942 164 ntBASIC5.86□□□□□ -1.47
Scn1aA2APX8 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Scn1aA2APX8 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm15152-201ENSMUST00000121540 394 ntBASIC5.85□□□□□ -1.47
Scn1aA2APX8 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm28188-201ENSMUST00000190483 236 ntBASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm18348-201ENSMUST00000191227 820 ntBASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm9332-201ENSMUST00000198431 730 ntBASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm43629-201ENSMUST00000201782 704 ntBASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm4587-201ENSMUST00000209135 637 ntBASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.85□□□□□ -1.47
Scn1aA2APX8 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.85□□□□□ -1.47
Scn1aA2APX8 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scn1aA2APX8 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm24230-201ENSMUST00000104313 129 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm15715-201ENSMUST00000118032 283 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm24236-201ENSMUST00000157794 134 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm21756-201ENSMUST00000178380 930 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm21405-201ENSMUST00000179024 930 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm27754-201ENSMUST00000183340 126 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm21191-201ENSMUST00000186484 930 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm29159-201ENSMUST00000187969 379 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm21654-201ENSMUST00000188086 691 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm29503-201ENSMUST00000191044 930 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm38185-201ENSMUST00000193195 694 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn1aA2APX8 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn1aA2APX8 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Scn1aA2APX8 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.84□□□□□ -1.47
Scn1aA2APX8 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn1aA2APX8 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.48
Scn1aA2APX8 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.84□□□□□ -1.48
Scn1aA2APX8 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.84□□□□□ -1.48
Scn1aA2APX8 Scarna13-201ENSMUST00000158164 275 ntBASIC5.84□□□□□ -1.48
Scn1aA2APX8 Gm23806-201ENSMUST00000175157 109 ntBASIC5.84□□□□□ -1.48
Scn1aA2APX8 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Scn1aA2APX8 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Scn1aA2APX8 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.84□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms