Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm13409-201ENSMUST00000122072 546 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm16259-201ENSMUST00000145241 553 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm25722-201ENSMUST00000157498 279 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm6264-201ENSMUST00000160802 624 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm34144-201ENSMUST00000197039 259 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm18867-201ENSMUST00000198022 1179 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm43850-201ENSMUST00000202021 578 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm44055-201ENSMUST00000204376 247 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm44856-201ENSMUST00000206639 304 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm46364-201ENSMUST00000218548 319 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 AC166263.1-201ENSMUST00000218586 238 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 AC073562.1-201ENSMUST00000222117 401 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 AC154640.1-202ENSMUST00000227828 496 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm26130-201ENSMUST00000083171 138 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Mir106b-201ENSMUST00000083580 82 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm38062-201ENSMUST00000192541 1856 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm13340-201ENSMUST00000117219 1545 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm42597-201ENSMUST00000196663 1544 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm11522-201ENSMUST00000120533 176 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm14620-201ENSMUST00000120656 383 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm25363-201ENSMUST00000158850 245 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm6245-201ENSMUST00000164699 768 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm8192-201ENSMUST00000182196 958 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm28117-201ENSMUST00000188472 371 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm29605-201ENSMUST00000190800 292 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm35323-201ENSMUST00000191836 499 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm37193-201ENSMUST00000193087 513 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 AC151967.1-201ENSMUST00000198146 76 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm19147-201ENSMUST00000199622 652 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm43228-201ENSMUST00000200735 264 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm17890-201ENSMUST00000221419 757 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm35619-201ENSMUST00000222548 600 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 AC122035.2-201ENSMUST00000228698 462 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Ube3bQ9ES34 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms