Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
Use1Q9CQ56 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm13114-201ENSMUST00000117605 106 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm15660-201ENSMUST00000118997 478 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm15152-201ENSMUST00000121540 394 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm2619-202ENSMUST00000166777 651 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm3344-201ENSMUST00000169610 603 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Mirt2-201ENSMUST00000175179 285 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm18006-201ENSMUST00000177411 662 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm7952-201ENSMUST00000180540 984 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm21877-201ENSMUST00000185640 694 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm21654-201ENSMUST00000188086 691 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm38030-201ENSMUST00000192376 475 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm38185-201ENSMUST00000193195 694 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm38040-201ENSMUST00000193505 225 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm37871-201ENSMUST00000194973 688 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm30646-201ENSMUST00000207662 180 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm18255-201ENSMUST00000211316 765 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Use1Q9CQ56 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm8256-203ENSMUST00000228692 591 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm23502-201ENSMUST00000083902 145 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.37□□□□□ -1.55
Use1Q9CQ56 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm11970-201ENSMUST00000116105 320 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm11270-201ENSMUST00000117685 471 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm12653-201ENSMUST00000117778 561 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm15877-201ENSMUST00000121897 964 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm25116-201ENSMUST00000157191 122 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm24186-201ENSMUST00000157983 127 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Use1Q9CQ56 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm27160-201ENSMUST00000184837 199 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm29519-201ENSMUST00000186994 398 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm3351-201ENSMUST00000193454 505 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm17952-201ENSMUST00000193914 747 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm20940-201ENSMUST00000197308 360 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Use1Q9CQ56 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm7042-201ENSMUST00000223027 384 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Use1Q9CQ56 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.36□□□□□ -1.55
Use1Q9CQ56 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Use1Q9CQ56 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Use1Q9CQ56 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Use1Q9CQ56 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms