Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Trim11Q99PQ2 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
Trim11Q99PQ2 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
Trim11Q99PQ2 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Snord88a-201ENSMUST00000116723 90 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm13141-201ENSMUST00000117417 456 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm6427-201ENSMUST00000118721 979 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm14038-201ENSMUST00000121500 807 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm22390-201ENSMUST00000157588 325 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm24545-201ENSMUST00000158651 85 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Igkv17-134-201ENSMUST00000168310 348 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm26381-201ENSMUST00000174895 92 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm9274-201ENSMUST00000182505 984 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm38097-201ENSMUST00000192936 439 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm43768-201ENSMUST00000198380 1258 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm44940-201ENSMUST00000206225 1247 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm45514-201ENSMUST00000211531 689 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm4042-201ENSMUST00000216946 637 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm19047-201ENSMUST00000220922 1099 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 AC131117.2-202ENSMUST00000224539 547 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 AC154371.1-201ENSMUST00000226600 412 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 AC154806.5-205ENSMUST00000228828 411 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 n-R5s56-201ENSMUST00000082521 105 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm38105-201ENSMUST00000192112 2621 ntBASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim11Q99PQ2 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Mir674-201ENSMUST00000102421 100 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm25760-201ENSMUST00000103989 132 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm12468-201ENSMUST00000116189 404 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm15621-201ENSMUST00000119162 364 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm12229-201ENSMUST00000120487 468 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm4997-201ENSMUST00000154056 360 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm22794-201ENSMUST00000157228 306 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm5456-201ENSMUST00000170706 844 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm17045-201ENSMUST00000178600 844 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm27617-201ENSMUST00000184321 168 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Mir6972-201ENSMUST00000184774 64 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm5252-201ENSMUST00000189030 909 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm18407-201ENSMUST00000192126 790 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm38328-201ENSMUST00000195582 317 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm43007-201ENSMUST00000197618 291 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm43171-201ENSMUST00000199882 291 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC7.51□□□□□ -1.21
Trim11Q99PQ2 AC153852.1-201ENSMUST00000217881 567 ntBASIC7.51□□□□□ -1.21
Trim11Q99PQ2 Gm9628-201ENSMUST00000222169 725 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms