Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm9127-201ENSMUST00000188041 985 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm38040-201ENSMUST00000193505 225 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm9278-201ENSMUST00000205508 553 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm31166-201ENSMUST00000209326 288 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm8288-201ENSMUST00000223406 593 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm7887-201ENSMUST00000056948 537 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm23502-201ENSMUST00000083902 145 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm14375-201ENSMUST00000119490 855 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm11369-201ENSMUST00000120812 318 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm21990-201ENSMUST00000124692 383 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm22160-201ENSMUST00000158405 328 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm23050-201ENSMUST00000158775 165 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm15257-201ENSMUST00000177680 883 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm15252-201ENSMUST00000177750 883 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm15256-201ENSMUST00000177793 883 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm26057-201ENSMUST00000178099 165 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm15260-201ENSMUST00000179402 883 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm37463-201ENSMUST00000193819 796 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm20940-201ENSMUST00000197308 360 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm42646-201ENSMUST00000202233 914 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm20786-201ENSMUST00000212649 436 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm7042-201ENSMUST00000223027 384 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm36262-201ENSMUST00000223274 499 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lsm1Q8VC85 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Lsm1Q8VC85 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.47□□□□□ -1.53
Lsm1Q8VC85 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Lsm1Q8VC85 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lsm1Q8VC85 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Lsm1Q8VC85 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lsm1Q8VC85 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Lsm1Q8VC85 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Lsm1Q8VC85 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Lsm1Q8VC85 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lsm1Q8VC85 Gm11970-201ENSMUST00000116105 320 ntBASIC5.47□□□□□ -1.53
Lsm1Q8VC85 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.47□□□□□ -1.53
Lsm1Q8VC85 Gm5405-201ENSMUST00000120478 609 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms