Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Vps39Q8R5L3 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm14580-201ENSMUST00000119122 718 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm26346-201ENSMUST00000157525 329 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm24363-201ENSMUST00000158440 311 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm23050-201ENSMUST00000158775 165 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm17511-201ENSMUST00000172206 342 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm26057-201ENSMUST00000178099 165 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm19073-201ENSMUST00000219978 555 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 AC122408.2-201ENSMUST00000217901 1391 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.75□□□□□ -1.49
Vps39Q8R5L3 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm11561-201ENSMUST00000117429 417 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm15660-201ENSMUST00000118997 478 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm14876-201ENSMUST00000120795 327 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm15877-201ENSMUST00000121897 964 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm11341-201ENSMUST00000122316 447 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Mir5128-201ENSMUST00000175217 84 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm28934-201ENSMUST00000186491 346 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm31306-201ENSMUST00000197517 508 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm36262-201ENSMUST00000223274 499 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 AV026068-216ENSMUST00000223874 328 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm6990-201ENSMUST00000086830 348 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm25099-201ENSMUST00000093716 116 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Vps39Q8R5L3 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Vps39Q8R5L3 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Vps39Q8R5L3 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Vps39Q8R5L3 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms