Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm14842-201ENSMUST00000119577 269 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm22867-201ENSMUST00000157499 109 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm23280-201ENSMUST00000157905 139 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm21756-201ENSMUST00000178380 930 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm21405-201ENSMUST00000179024 930 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm21191-201ENSMUST00000186484 930 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm21654-201ENSMUST00000188086 691 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm28066-201ENSMUST00000188657 472 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm29503-201ENSMUST00000191044 930 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm38185-201ENSMUST00000193195 694 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm20770-201ENSMUST00000193474 694 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm44316-201ENSMUST00000199274 97 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm19060-201ENSMUST00000201959 421 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm45185-201ENSMUST00000207556 404 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm18996-201ENSMUST00000214851 755 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC6.73□□□□□ -1.33
Nup88Q8CEC0 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 AC153959.1-201ENSMUST00000213617 1694 ntBASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Gm25152-201ENSMUST00000157117 114 ntBASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Gm24767-201ENSMUST00000158509 95 ntBASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Gm37716-201ENSMUST00000193553 947 ntBASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Gm43456-201ENSMUST00000202519 457 ntBASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.72□□□□□ -1.33
Nup88Q8CEC0 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.72□□□□□ -1.33
Nup88Q8CEC0 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.72□□□□□ -1.33
Nup88Q8CEC0 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Nup88Q8CEC0 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.71□□□□□ -1.33
Nup88Q8CEC0 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Nup88Q8CEC0 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Nup88Q8CEC0 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Nup88Q8CEC0 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.71□□□□□ -1.33
Nup88Q8CEC0 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Nup88Q8CEC0 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms