Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm45070-201ENSMUST00000208100 246 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm46223-201ENSMUST00000215196 675 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm6056-201ENSMUST00000221253 488 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm10095-201ENSMUST00000222765 483 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm36262-201ENSMUST00000223274 499 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm43210-201ENSMUST00000196743 6152 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm13451-201ENSMUST00000117649 592 ntBASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm13059-201ENSMUST00000119881 398 ntBASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm15103-201ENSMUST00000119893 871 ntBASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm14349-201ENSMUST00000137155 902 ntBASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm3715-201ENSMUST00000172308 617 ntBASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm35013-201ENSMUST00000197218 832 ntBASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.9□□□□□ -1.3
Vps53Q8CCB4 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm23058-201ENSMUST00000093703 107 ntBASIC6.9□□□□□ -1.3
Vps53Q8CCB4 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.9□□□□□ -1.31
Vps53Q8CCB4 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Vps53Q8CCB4 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Vps53Q8CCB4 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Vps53Q8CCB4 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Vps53Q8CCB4 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.9□□□□□ -1.31
Vps53Q8CCB4 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Vps53Q8CCB4 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Vps53Q8CCB4 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Gm12901-201ENSMUST00000118690 532 ntBASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Gm3931-201ENSMUST00000119038 455 ntBASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Gm16074-201ENSMUST00000119524 444 ntBASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Gm4234-201ENSMUST00000119747 714 ntBASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Gm14331-201ENSMUST00000120396 409 ntBASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Gm15801-201ENSMUST00000120920 522 ntBASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Gm22636-201ENSMUST00000158142 275 ntBASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Gm8783-201ENSMUST00000159764 522 ntBASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC6.89□□□□□ -1.31
Vps53Q8CCB4 Gm37784-201ENSMUST00000193233 189 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms