Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
AtmQ62388 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AtmQ62388 Gm2429-201ENSMUST00000194635 586 ntBASIC5.17□□□□□ -1.58
AtmQ62388 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
AtmQ62388 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
AtmQ62388 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AtmQ62388 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AtmQ62388 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
AtmQ62388 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
AtmQ62388 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
AtmQ62388 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AtmQ62388 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
AtmQ62388 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AtmQ62388 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AtmQ62388 Gm12189-201ENSMUST00000119779 912 ntBASIC5.17□□□□□ -1.58
AtmQ62388 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.17□□□□□ -1.58
AtmQ62388 Gm37670-201ENSMUST00000193622 229 ntBASIC5.17□□□□□ -1.58
AtmQ62388 Gm17994-201ENSMUST00000209260 533 ntBASIC5.17□□□□□ -1.58
AtmQ62388 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.17□□□□□ -1.58
AtmQ62388 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AtmQ62388 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
AtmQ62388 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
AtmQ62388 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AtmQ62388 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Gm14628-201ENSMUST00000117508 635 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Gm15828-201ENSMUST00000119911 522 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Gm14037-201ENSMUST00000120576 313 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Gm27834-201ENSMUST00000183427 125 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC5.16□□□□□ -1.58
AtmQ62388 Gm38053-201ENSMUST00000193938 160 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.16□□□□□ -1.58
AtmQ62388 Gm9057-201ENSMUST00000198791 296 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Gm10705-201ENSMUST00000098980 461 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Gm45528-201ENSMUST00000209854 3145 ntBASIC5.16□□□□□ -1.58
AtmQ62388 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
AtmQ62388 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
AtmQ62388 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
AtmQ62388 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
AtmQ62388 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC5.16□□□□□ -1.58
AtmQ62388 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
AtmQ62388 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
AtmQ62388 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Snord66-201ENSMUST00000104051 75 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
AtmQ62388 Gm7657-201ENSMUST00000118851 666 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Gm23883-201ENSMUST00000122686 290 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
AtmQ62388 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC5.16□□□□□ -1.58
AtmQ62388 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.16□□□□□ -1.58
AtmQ62388 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.16□□□□□ -1.58
AtmQ62388 Gm9278-201ENSMUST00000205508 553 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC5.16□□□□□ -1.58
AtmQ62388 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC5.16□□□□□ -1.58
AtmQ62388 Gm6906-201ENSMUST00000218014 569 ntBASIC5.16□□□□□ -1.58
AtmQ62388 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
AtmQ62388 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
AtmQ62388 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
AtmQ62388 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
AtmQ62388 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
AtmQ62388 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
AtmQ62388 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC5.15□□□□□ -1.58
AtmQ62388 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.15□□□□□ -1.58
AtmQ62388 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
AtmQ62388 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
AtmQ62388 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
AtmQ62388 Gm24350-201ENSMUST00000104163 133 ntBASIC5.15□□□□□ -1.58
AtmQ62388 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.15□□□□□ -1.58
AtmQ62388 Gm13232-201ENSMUST00000121816 632 ntBASIC5.15□□□□□ -1.58
AtmQ62388 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
AtmQ62388 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.15□□□□□ -1.58
AtmQ62388 Gm45700-201ENSMUST00000205866 347 ntBASIC5.15□□□□□ -1.58
AtmQ62388 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.15□□□□□ -1.58
AtmQ62388 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
AtmQ62388 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
AtmQ62388 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.15□□□□□ -1.58
AtmQ62388 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.15□□□□□ -1.58
AtmQ62388 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
AtmQ62388 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
AtmQ62388 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
AtmQ62388 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
AtmQ62388 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
AtmQ62388 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
AtmQ62388 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
AtmQ62388 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
AtmQ62388 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.15□□□□□ -1.59
AtmQ62388 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.15□□□□□ -1.59
AtmQ62388 Gm22792-201ENSMUST00000157225 133 ntBASIC5.15□□□□□ -1.59
AtmQ62388 Gm26034-201ENSMUST00000158154 116 ntBASIC5.15□□□□□ -1.59
AtmQ62388 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
AtmQ62388 Gm20614-201ENSMUST00000177106 632 ntBASIC5.15□□□□□ -1.59
AtmQ62388 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
AtmQ62388 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.15□□□□□ -1.59
AtmQ62388 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC5.15□□□□□ -1.59
AtmQ62388 Gm4321-201ENSMUST00000200520 442 ntBASIC5.15□□□□□ -1.59
AtmQ62388 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms