Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm13428-201ENSMUST00000117540 365 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm14783-201ENSMUST00000118900 663 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm5405-201ENSMUST00000120478 609 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm25363-201ENSMUST00000158850 245 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm19560-201ENSMUST00000177510 514 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm2539-203ENSMUST00000181352 746 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Mir7235-201ENSMUST00000183796 56 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm27219-201ENSMUST00000184633 742 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm44221-201ENSMUST00000203552 388 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Snora44-201ENSMUST00000082670 129 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm12193-201ENSMUST00000117250 379 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm5834-201ENSMUST00000126680 1026 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm37336-202ENSMUST00000193705 468 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm7990-201ENSMUST00000212126 593 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm6991-201ENSMUST00000218475 1178 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm18413-201ENSMUST00000221573 655 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 AC132260.2-201ENSMUST00000224482 344 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.65□□□□□ -1.5
Trafd1Q3UDK1 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.65□□□□□ -1.51
Trafd1Q3UDK1 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Trafd1Q3UDK1 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trafd1Q3UDK1 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Trafd1Q3UDK1 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Trafd1Q3UDK1 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trafd1Q3UDK1 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trafd1Q3UDK1 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trafd1Q3UDK1 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Trafd1Q3UDK1 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Trafd1Q3UDK1 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.65□□□□□ -1.51
Trafd1Q3UDK1 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms