Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm27317-201ENSMUST00000183533 95 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Mir6361-201ENSMUST00000185079 101 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm28847-201ENSMUST00000186778 700 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm43215-201ENSMUST00000199108 252 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm19617-201ENSMUST00000202977 308 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm44312-201ENSMUST00000203536 469 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm44404-201ENSMUST00000203979 636 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm18467-201ENSMUST00000208805 434 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm45899-201ENSMUST00000212196 1276 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm18388-201ENSMUST00000222339 557 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm33312-201ENSMUST00000222443 332 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 AC164436.1-201ENSMUST00000227074 772 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm24695-201ENSMUST00000083877 83 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Mir465-201ENSMUST00000093563 74 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col8a1Q00780 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 AC139350.2-201ENSMUST00000226508 2331 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
Col8a1Q00780 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm31049-201ENSMUST00000201516 1302 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
Col8a1Q00780 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col8a1Q00780 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Col8a1Q00780 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col8a1Q00780 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col8a1Q00780 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Col8a1Q00780 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
Col8a1Q00780 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Col8a1Q00780 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col8a1Q00780 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Col8a1Q00780 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
Col8a1Q00780 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col8a1Q00780 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col8a1Q00780 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col8a1Q00780 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col8a1Q00780 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC5.71□□□□□ -1.5
Col8a1Q00780 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col8a1Q00780 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Col8a1Q00780 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col8a1Q00780 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col8a1Q00780 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col8a1Q00780 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col8a1Q00780 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col8a1Q00780 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col8a1Q00780 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col8a1Q00780 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col8a1Q00780 AC111010.1-203ENSMUST00000227287 1548 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm38082-201ENSMUST00000192800 6882 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col8a1Q00780 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm22371-201ENSMUST00000104588 130 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm24835-201ENSMUST00000116777 111 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm15659-201ENSMUST00000118881 341 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm15186-201ENSMUST00000119345 563 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm11504-201ENSMUST00000120211 173 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm11904-201ENSMUST00000120562 248 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm14982-201ENSMUST00000121102 442 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm12630-201ENSMUST00000121575 784 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.71□□□□□ -1.5
Col8a1Q00780 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC5.71□□□□□ -1.5
Col8a1Q00780 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm22210-201ENSMUST00000158101 144 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm19840-201ENSMUST00000169624 882 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm8895-201ENSMUST00000172300 1223 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm18417-201ENSMUST00000176564 648 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col8a1Q00780 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm7654-201ENSMUST00000186738 683 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.71□□□□□ -1.5
Col8a1Q00780 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm42622-201ENSMUST00000197229 355 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm42814-201ENSMUST00000199370 460 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm43472-201ENSMUST00000200175 154 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm38840-201ENSMUST00000204716 843 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm44943-201ENSMUST00000207254 300 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm44654-201ENSMUST00000208052 329 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm44833-201ENSMUST00000208368 331 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 AC156504.1-201ENSMUST00000214608 157 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm18252-203ENSMUST00000215855 757 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 Gm18228-201ENSMUST00000217297 1091 ntBASIC5.71□□□□□ -1.5
Col8a1Q00780 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms