Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Nkx3-1P97436 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Nkx3-1P97436 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Gm38224-201ENSMUST00000191648 2100 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
Nkx3-1P97436 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Gm44043-201ENSMUST00000203426 3253 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5□□□□□ -1.61
Nkx3-1P97436 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5□□□□□ -1.61
Nkx3-1P97436 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5□□□□□ -1.61
Nkx3-1P97436 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Nkx3-1P97436 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Gm15531-201ENSMUST00000118062 252 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Gm15044-201ENSMUST00000120703 598 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Gm22106-201ENSMUST00000122544 127 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5□□□□□ -1.61
Nkx3-1P97436 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5□□□□□ -1.61
Nkx3-1P97436 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Gm37560-201ENSMUST00000194289 1000 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Gm2429-201ENSMUST00000194635 586 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Gm38384-201ENSMUST00000195413 1122 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5□□□□□ -1.61
Nkx3-1P97436 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Gm18689-201ENSMUST00000203969 902 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Gm31166-201ENSMUST00000209326 288 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Gm45249-201ENSMUST00000211021 348 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5□□□□□ -1.61
Nkx3-1P97436 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5□□□□□ -1.61
Nkx3-1P97436 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5□□□□□ -1.61
Nkx3-1P97436 CT025579.3-201ENSMUST00000224543 451 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Nkx3-1P97436 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Nkx3-1P97436 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Nkx3-1P97436 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5□□□□□ -1.61
Nkx3-1P97436 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5□□□□□ -1.61
Nkx3-1P97436 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx3-1P97436 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Nkx3-1P97436 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5□□□□□ -1.61
Nkx3-1P97436 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm44901-201ENSMUST00000208157 3977 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm37082-201ENSMUST00000192629 1927 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm43745-201ENSMUST00000198085 1883 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm11908-201ENSMUST00000117755 347 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm13866-201ENSMUST00000118901 968 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm13887-201ENSMUST00000119009 344 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm25824-201ENSMUST00000157092 121 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm23954-201ENSMUST00000157213 353 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm26172-201ENSMUST00000158421 134 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm26167-201ENSMUST00000158423 253 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Scarna6-201ENSMUST00000158656 265 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm20397-201ENSMUST00000174520 362 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Mir3080-201ENSMUST00000175010 79 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm27225-201ENSMUST00000183833 557 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Mir7687-201ENSMUST00000184722 59 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm17994-201ENSMUST00000209260 533 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm6474-201ENSMUST00000223250 699 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 AC156016.5-201ENSMUST00000228742 355 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Mir188-201ENSMUST00000083464 68 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm37435-201ENSMUST00000192078 3947 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm37943-201ENSMUST00000194053 3944 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 Gm21122-201ENSMUST00000191548 3452 ntBASIC4.99□□□□□ -1.61
Nkx3-1P97436 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms