Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm27373-201ENSMUST00000184017 184 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm27401-201ENSMUST00000184052 173 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm27636-201ENSMUST00000184528 122 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm18448-201ENSMUST00000186286 599 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm37493-201ENSMUST00000193167 433 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm3511-201ENSMUST00000199823 204 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm43171-201ENSMUST00000199882 291 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm43926-201ENSMUST00000203978 430 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm44979-201ENSMUST00000206218 287 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm7394-201ENSMUST00000209138 1032 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC6.03□□□□□ -1.44
Sf3b6P59708 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 AL590614.1-201ENSMUST00000226037 268 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 AC117202.1-201ENSMUST00000227007 445 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 AC125087.1-201ENSMUST00000227552 514 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Gm13712-201ENSMUST00000117484 2295 ntBASIC6.02□□□□□ -1.44
Sf3b6P59708 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
Sf3b6P59708 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sf3b6P59708 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sf3b6P59708 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sf3b6P59708 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sf3b6P59708 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sf3b6P59708 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.02□□□□□ -1.45
Sf3b6P59708 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sf3b6P59708 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sf3b6P59708 Gm10601-201ENSMUST00000120436 1422 ntBASIC6.02□□□□□ -1.45
Sf3b6P59708 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sf3b6P59708 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sf3b6P59708 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sf3b6P59708 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sf3b6P59708 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sf3b6P59708 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sf3b6P59708 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC6.02□□□□□ -1.45
Sf3b6P59708 Gm13728-201ENSMUST00000117471 400 ntBASIC6.02□□□□□ -1.45
Sf3b6P59708 Gm11880-201ENSMUST00000117612 399 ntBASIC6.02□□□□□ -1.45
Sf3b6P59708 Gm14248-201ENSMUST00000117790 544 ntBASIC6.02□□□□□ -1.45
Sf3b6P59708 Gm8534-201ENSMUST00000118553 766 ntBASIC6.02□□□□□ -1.45
Sf3b6P59708 Gm15126-201ENSMUST00000118631 833 ntBASIC6.02□□□□□ -1.45
Sf3b6P59708 Gm15362-201ENSMUST00000121459 388 ntBASIC6.02□□□□□ -1.45
Sf3b6P59708 Gm23885-201ENSMUST00000122682 294 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms