Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.22□□□□□ -1.41
NcanP55066 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.22□□□□□ -1.41
NcanP55066 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
NcanP55066 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
NcanP55066 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
NcanP55066 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.22□□□□□ -1.41
NcanP55066 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Gm24265-201ENSMUST00000101833 141 ntBASIC6.22□□□□□ -1.41
NcanP55066 Gm6134-201ENSMUST00000117265 171 ntBASIC6.22□□□□□ -1.41
NcanP55066 Gm11488-201ENSMUST00000117277 863 ntBASIC6.22□□□□□ -1.41
NcanP55066 Gm7309-201ENSMUST00000121670 581 ntBASIC6.22□□□□□ -1.41
NcanP55066 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.22□□□□□ -1.41
NcanP55066 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Gm7609-204ENSMUST00000161424 461 ntBASIC6.22□□□□□ -1.41
NcanP55066 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
NcanP55066 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
NcanP55066 Gm22122-201ENSMUST00000175147 200 ntBASIC6.22□□□□□ -1.41
NcanP55066 Gm24407-201ENSMUST00000177864 141 ntBASIC6.22□□□□□ -1.41
NcanP55066 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.22□□□□□ -1.41
NcanP55066 Gm28923-201ENSMUST00000187755 322 ntBASIC6.22□□□□□ -1.41
NcanP55066 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.22□□□□□ -1.41
NcanP55066 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Gm44307-201ENSMUST00000204466 764 ntBASIC6.22□□□□□ -1.41
NcanP55066 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC6.22□□□□□ -1.41
NcanP55066 Gm45731-201ENSMUST00000211988 1203 ntBASIC6.22□□□□□ -1.41
NcanP55066 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.22□□□□□ -1.41
NcanP55066 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC6.22□□□□□ -1.41
NcanP55066 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
NcanP55066 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
NcanP55066 n-R5s13-201ENSMUST00000093707 119 ntBASIC6.22□□□□□ -1.41
NcanP55066 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.22□□□□□ -1.41
NcanP55066 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.22□□□□□ -1.41
NcanP55066 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
NcanP55066 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
NcanP55066 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.22□□□□□ -1.41
NcanP55066 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.22□□□□□ -1.41
NcanP55066 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.22□□□□□ -1.41
NcanP55066 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
NcanP55066 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.22□□□□□ -1.41
NcanP55066 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
NcanP55066 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.22□□□□□ -1.41
NcanP55066 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
NcanP55066 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
NcanP55066 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NcanP55066 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.21□□□□□ -1.41
NcanP55066 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
NcanP55066 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.21□□□□□ -1.41
NcanP55066 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
NcanP55066 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
NcanP55066 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
NcanP55066 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
NcanP55066 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
NcanP55066 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.21□□□□□ -1.41
NcanP55066 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NcanP55066 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NcanP55066 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
NcanP55066 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.21□□□□□ -1.42
NcanP55066 Gm22899-201ENSMUST00000104540 131 ntBASIC6.21□□□□□ -1.42
NcanP55066 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NcanP55066 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NcanP55066 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC6.21□□□□□ -1.42
NcanP55066 Gm15670-201ENSMUST00000117740 447 ntBASIC6.21□□□□□ -1.42
NcanP55066 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NcanP55066 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC6.21□□□□□ -1.42
NcanP55066 Gm2429-201ENSMUST00000194635 586 ntBASIC6.21□□□□□ -1.42
NcanP55066 Gm18702-201ENSMUST00000196923 588 ntBASIC6.21□□□□□ -1.42
NcanP55066 Gm43524-201ENSMUST00000197278 298 ntBASIC6.21□□□□□ -1.42
NcanP55066 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC6.21□□□□□ -1.42
NcanP55066 Gm44108-201ENSMUST00000203525 422 ntBASIC6.21□□□□□ -1.42
NcanP55066 Gm45226-201ENSMUST00000206602 288 ntBASIC6.21□□□□□ -1.42
NcanP55066 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.21□□□□□ -1.42
NcanP55066 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.21□□□□□ -1.42
NcanP55066 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.21□□□□□ -1.42
NcanP55066 AC158955.1-201ENSMUST00000227140 385 ntBASIC6.21□□□□□ -1.42
NcanP55066 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NcanP55066 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
NcanP55066 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
NcanP55066 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC6.21□□□□□ -1.42
NcanP55066 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
NcanP55066 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
NcanP55066 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NcanP55066 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
NcanP55066 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
NcanP55066 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms