Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm23069-201ENSMUST00000158240 311 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm2619-202ENSMUST00000166777 651 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm6223-201ENSMUST00000178436 871 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm29011-201ENSMUST00000191059 712 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm38177-201ENSMUST00000192213 1040 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm4856-201ENSMUST00000192696 1091 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm6119-201ENSMUST00000193443 1206 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm37719-201ENSMUST00000194615 292 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm18689-201ENSMUST00000203969 902 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm4574-201ENSMUST00000207804 542 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm18193-201ENSMUST00000210017 772 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm7351-201ENSMUST00000210745 580 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm18103-201ENSMUST00000216621 779 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 AC153505.2-201ENSMUST00000217741 277 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 AC163621.1-201ENSMUST00000220695 379 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 AC121947.1-201ENSMUST00000221755 1145 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 AC102139.1-201ENSMUST00000227000 251 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm8412-201ENSMUST00000077493 440 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Mir138-1-201ENSMUST00000083480 99 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Mir7b-201ENSMUST00000083557 111 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Nkx2-1P50220 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx2-1P50220 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx2-1P50220 Gm37959-201ENSMUST00000191700 2897 ntBASIC4.79□□□□□ -1.64
Nkx2-1P50220 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm42968-201ENSMUST00000198578 1372 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm9519-201ENSMUST00000206108 1337 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 AC130831.1-201ENSMUST00000224546 1474 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm11447-201ENSMUST00000118983 858 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm6744-201ENSMUST00000119303 543 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm16016-201ENSMUST00000120831 550 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm27044-201ENSMUST00000183033 796 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm28885-201ENSMUST00000185615 563 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms