Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Brca1P48754 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Brca1P48754 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Brca1P48754 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Brca1P48754 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Brca1P48754 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Brca1P48754 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.4□□□□□ -1.38
Brca1P48754 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Brca1P48754 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Brca1P48754 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.4□□□□□ -1.38
Brca1P48754 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Brca1P48754 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Brca1P48754 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC6.4□□□□□ -1.38
Brca1P48754 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.4□□□□□ -1.38
Brca1P48754 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC6.4□□□□□ -1.38
Brca1P48754 Gm23279-201ENSMUST00000157912 97 ntBASIC6.4□□□□□ -1.38
Brca1P48754 Gm22726-201ENSMUST00000158089 179 ntBASIC6.4□□□□□ -1.38
Brca1P48754 Gm24735-201ENSMUST00000158859 118 ntBASIC6.4□□□□□ -1.38
Brca1P48754 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Brca1P48754 Gm29474-201ENSMUST00000187688 379 ntBASIC6.4□□□□□ -1.38
Brca1P48754 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC6.4□□□□□ -1.38
Brca1P48754 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC6.4□□□□□ -1.38
Brca1P48754 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.38
Brca1P48754 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.4□□□□□ -1.38
Brca1P48754 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Brca1P48754 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.4□□□□□ -1.39
Brca1P48754 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Brca1P48754 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Brca1P48754 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Brca1P48754 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Brca1P48754 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Brca1P48754 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.4□□□□□ -1.39
Brca1P48754 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Brca1P48754 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Brca1P48754 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.39□□□□□ -1.39
Brca1P48754 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.39□□□□□ -1.39
Brca1P48754 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Brca1P48754 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Brca1P48754 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Brca1P48754 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Brca1P48754 Gm12641-201ENSMUST00000117874 985 ntBASIC6.39□□□□□ -1.39
Brca1P48754 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC6.39□□□□□ -1.39
Brca1P48754 Mir1946b-201ENSMUST00000157853 133 ntBASIC6.39□□□□□ -1.39
Brca1P48754 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 Gm27875-201ENSMUST00000184425 123 ntBASIC6.39□□□□□ -1.39
Brca1P48754 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.39□□□□□ -1.39
Brca1P48754 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.39□□□□□ -1.39
Brca1P48754 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.39□□□□□ -1.39
Brca1P48754 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.39□□□□□ -1.39
Brca1P48754 CT956049.1-201ENSMUST00000225671 763 ntBASIC6.39□□□□□ -1.39
Brca1P48754 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.39□□□□□ -1.39
Brca1P48754 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Brca1P48754 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.39□□□□□ -1.39
Brca1P48754 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.39□□□□□ -1.39
Brca1P48754 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC6.39□□□□□ -1.39
Brca1P48754 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Brca1P48754 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Brca1P48754 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
Brca1P48754 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC6.39□□□□□ -1.39
Brca1P48754 Gm13435-201ENSMUST00000120111 1023 ntBASIC6.39□□□□□ -1.39
Brca1P48754 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6.39□□□□□ -1.39
Brca1P48754 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC6.39□□□□□ -1.39
Brca1P48754 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Brca1P48754 S100a11-ps-201ENSMUST00000181735 306 ntBASIC6.39□□□□□ -1.39
Brca1P48754 Gm27286-201ENSMUST00000184934 179 ntBASIC6.39□□□□□ -1.39
Brca1P48754 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.39□□□□□ -1.39
Brca1P48754 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Brca1P48754 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC6.39□□□□□ -1.39
Brca1P48754 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Brca1P48754 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 Gm21041-201ENSMUST00000214829 823 ntBASIC6.39□□□□□ -1.39
Brca1P48754 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Brca1P48754 Gm4963-201ENSMUST00000072718 378 ntBASIC6.39□□□□□ -1.39
Brca1P48754 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Brca1P48754 Gm6104-201ENSMUST00000078030 603 ntBASIC6.39□□□□□ -1.39
Brca1P48754 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Brca1P48754 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.39□□□□□ -1.39
Brca1P48754 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Brca1P48754 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Brca1P48754 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.38□□□□□ -1.39
Brca1P48754 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms