Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.75□□□□□ -1.49
HttP42859 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.74□□□□□ -1.49
HttP42859 Gm12237-201ENSMUST00000120158 470 ntBASIC5.74□□□□□ -1.49
HttP42859 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.74□□□□□ -1.49
HttP42859 Gm31306-201ENSMUST00000197517 508 ntBASIC5.74□□□□□ -1.49
HttP42859 Gm17994-201ENSMUST00000209260 533 ntBASIC5.74□□□□□ -1.49
HttP42859 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.74□□□□□ -1.49
HttP42859 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.74□□□□□ -1.49
HttP42859 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HttP42859 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Gm43961-201ENSMUST00000203289 1872 ntBASIC5.74□□□□□ -1.49
HttP42859 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.74□□□□□ -1.49
HttP42859 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HttP42859 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.74□□□□□ -1.49
HttP42859 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HttP42859 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HttP42859 Gm23839-201ENSMUST00000116957 109 ntBASIC5.74□□□□□ -1.49
HttP42859 Gm11972-201ENSMUST00000118514 389 ntBASIC5.74□□□□□ -1.49
HttP42859 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC5.74□□□□□ -1.49
HttP42859 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HttP42859 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.74□□□□□ -1.49
HttP42859 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.74□□□□□ -1.49
HttP42859 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.74□□□□□ -1.49
HttP42859 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HttP42859 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.74□□□□□ -1.49
HttP42859 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Gm13338-201ENSMUST00000120235 361 ntBASIC5.74□□□□□ -1.49
HttP42859 Gm15840-201ENSMUST00000122099 943 ntBASIC5.74□□□□□ -1.49
HttP42859 Gm15075-201ENSMUST00000122187 477 ntBASIC5.74□□□□□ -1.49
HttP42859 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HttP42859 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Gm29196-201ENSMUST00000189239 618 ntBASIC5.74□□□□□ -1.49
HttP42859 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HttP42859 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HttP42859 Pbrm1-204ENSMUST00000090214 6212 ntTSL 5 BASIC5.74□□□□□ -1.49
HttP42859 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HttP42859 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HttP42859 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HttP42859 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HttP42859 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HttP42859 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HttP42859 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HttP42859 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HttP42859 Gm14874-201ENSMUST00000118995 438 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm4911-201ENSMUST00000119388 945 ntBASIC5.73□□□□□ -1.49
HttP42859 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC5.73□□□□□ -1.49
HttP42859 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm15500-201ENSMUST00000071523 894 ntBASIC5.73□□□□□ -1.49
HttP42859 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HttP42859 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HttP42859 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HttP42859 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.73□□□□□ -1.49
HttP42859 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HttP42859 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
HttP42859 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HttP42859 Gm22468-201ENSMUST00000116680 120 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm26248-201ENSMUST00000116700 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm26137-201ENSMUST00000116701 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm26190-201ENSMUST00000116704 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm24617-201ENSMUST00000116705 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm25778-201ENSMUST00000116713 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm25774-201ENSMUST00000116717 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm22102-201ENSMUST00000116730 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm23177-201ENSMUST00000116784 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm24193-201ENSMUST00000116801 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm24744-201ENSMUST00000116833 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm24427-201ENSMUST00000116896 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm22346-201ENSMUST00000116918 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm23606-201ENSMUST00000116938 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm22029-201ENSMUST00000116940 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm26298-201ENSMUST00000116956 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm23844-201ENSMUST00000116959 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm24484-201ENSMUST00000117009 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm25347-201ENSMUST00000117026 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm22112-201ENSMUST00000117032 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm22991-201ENSMUST00000178126 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm25754-201ENSMUST00000178653 121 ntBASIC5.73□□□□□ -1.49
HttP42859 Gm22419-201ENSMUST00000178780 121 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms