Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col2a1P28481 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col2a1P28481 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col2a1P28481 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col2a1P28481 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col2a1P28481 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col2a1P28481 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col2a1P28481 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col2a1P28481 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col2a1P28481 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col2a1P28481 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col2a1P28481 Gm45172-201ENSMUST00000206054 1301 ntBASIC6.44□□□□□ -1.38
Col2a1P28481 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col2a1P28481 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col2a1P28481 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col2a1P28481 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col2a1P28481 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC6.43□□□□□ -1.38
Col2a1P28481 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.43□□□□□ -1.38
Col2a1P28481 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col2a1P28481 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col2a1P28481 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 Gm23839-201ENSMUST00000116957 109 ntBASIC6.43□□□□□ -1.38
Col2a1P28481 Gm15490-201ENSMUST00000119894 387 ntBASIC6.43□□□□□ -1.38
Col2a1P28481 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.43□□□□□ -1.38
Col2a1P28481 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Col2a1P28481 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.43□□□□□ -1.38
Col2a1P28481 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.43□□□□□ -1.38
Col2a1P28481 AC153870.1-201ENSMUST00000219599 560 ntBASIC6.43□□□□□ -1.38
Col2a1P28481 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.43□□□□□ -1.38
Col2a1P28481 AC134860.4-201ENSMUST00000223592 978 ntBASIC6.43□□□□□ -1.38
Col2a1P28481 AC102291.1-201ENSMUST00000227164 529 ntBASIC6.43□□□□□ -1.38
Col2a1P28481 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col2a1P28481 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col2a1P28481 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.43□□□□□ -1.38
Col2a1P28481 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col2a1P28481 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col2a1P28481 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.43□□□□□ -1.38
Col2a1P28481 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC6.43□□□□□ -1.38
Col2a1P28481 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 Gm7919-201ENSMUST00000202043 1389 ntBASIC6.43□□□□□ -1.38
Col2a1P28481 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.43□□□□□ -1.38
Col2a1P28481 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
Col2a1P28481 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.43□□□□□ -1.38
Col2a1P28481 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col2a1P28481 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 Gm9429-201ENSMUST00000117804 868 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Gm14874-201ENSMUST00000118995 438 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Gm11617-201ENSMUST00000119609 639 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Gm11677-201ENSMUST00000121349 977 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Gm13007-201ENSMUST00000121866 365 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col2a1P28481 Gm6872-201ENSMUST00000165001 700 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.42□□□□□ -1.38
Col2a1P28481 Gm29592-201ENSMUST00000189434 370 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.42□□□□□ -1.38
Col2a1P28481 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 Gm43444-201ENSMUST00000198123 291 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.42□□□□□ -1.38
Col2a1P28481 Gm45700-201ENSMUST00000205866 347 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Gm45008-201ENSMUST00000206420 493 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Gm17992-201ENSMUST00000207346 1072 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Col2a1P28481 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.42□□□□□ -1.38
Col2a1P28481 AC238676.3-201ENSMUST00000223042 154 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Gm6474-201ENSMUST00000223250 699 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 CT010486.1-201ENSMUST00000224609 422 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col2a1P28481 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.42□□□□□ -1.38
Col2a1P28481 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col2a1P28481 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col2a1P28481 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col2a1P28481 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms