Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Sdc1P18828 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC4.58□□□□□ -1.68
Sdc1P18828 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.58□□□□□ -1.68
Sdc1P18828 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sdc1P18828 Gm8750-201ENSMUST00000173278 1537 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Sdc1P18828 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sdc1P18828 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sdc1P18828 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
Sdc1P18828 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Sdc1P18828 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sdc1P18828 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC4.57□□□□□ -1.68
Sdc1P18828 Gm15185-201ENSMUST00000117397 746 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm15216-201ENSMUST00000118058 277 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm14985-201ENSMUST00000118693 786 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm14115-201ENSMUST00000119242 482 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm8312-201ENSMUST00000119380 618 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm11954-201ENSMUST00000121403 349 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm11879-201ENSMUST00000121885 702 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC4.57□□□□□ -1.68
Sdc1P18828 Gm22035-201ENSMUST00000157284 228 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm25374-201ENSMUST00000158158 101 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm27019-201ENSMUST00000183056 404 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Mir6940-201ENSMUST00000183447 70 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm28871-201ENSMUST00000186191 687 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm28660-201ENSMUST00000186496 253 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
Sdc1P18828 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC4.57□□□□□ -1.68
Sdc1P18828 Gm3121-201ENSMUST00000187086 406 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Sdc1P18828 Mir6516-201ENSMUST00000196236 110 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm9504-201ENSMUST00000196322 468 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm43354-201ENSMUST00000196862 346 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sdc1P18828 Gm31211-201ENSMUST00000199170 253 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm44219-201ENSMUST00000203005 273 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC4.57□□□□□ -1.68
Sdc1P18828 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sdc1P18828 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sdc1P18828 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sdc1P18828 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sdc1P18828 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sdc1P18828 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.57□□□□□ -1.68
Sdc1P18828 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sdc1P18828 Gm37114-201ENSMUST00000195065 1804 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sdc1P18828 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.57□□□□□ -1.68
Sdc1P18828 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.57□□□□□ -1.68
Sdc1P18828 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sdc1P18828 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.57□□□□□ -1.68
Sdc1P18828 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sdc1P18828 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Sdc1P18828 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sdc1P18828 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sdc1P18828 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sdc1P18828 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
Sdc1P18828 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sdc1P18828 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sdc1P18828 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sdc1P18828 Abcc2-202ENSMUST00000099413 1926 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sdc1P18828 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sdc1P18828 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sdc1P18828 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Sdc1P18828 Gm11342-203ENSMUST00000224879 1324 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sdc1P18828 Gm9144-201ENSMUST00000101625 1008 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Sdc1P18828 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC4.56□□□□□ -1.68
Sdc1P18828 Gm10241-201ENSMUST00000117664 286 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 Gm13924-201ENSMUST00000119899 486 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 Gm14465-201ENSMUST00000120603 567 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 Gm12778-201ENSMUST00000122341 333 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC4.56□□□□□ -1.68
Sdc1P18828 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC4.56□□□□□ -1.68
Sdc1P18828 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC4.56□□□□□ -1.68
Sdc1P18828 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Sdc1P18828 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Sdc1P18828 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sdc1P18828 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC4.56□□□□□ -1.68
Sdc1P18828 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC4.56□□□□□ -1.68
Sdc1P18828 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sdc1P18828 Gm27266-201ENSMUST00000184521 123 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 Gm20813-201ENSMUST00000186646 705 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 Gm21923-201ENSMUST00000188455 696 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC4.56□□□□□ -1.68
Sdc1P18828 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Sdc1P18828 Gm43717-201ENSMUST00000198684 310 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Sdc1P18828 Gm8719-201ENSMUST00000203602 534 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Sdc1P18828 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC4.56□□□□□ -1.68
Sdc1P18828 Gm272-201ENSMUST00000222073 919 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 AC151730.1-201ENSMUST00000226106 448 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms