Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.54□□□□□ -1.68
Hmgb3O54879 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm33178-201ENSMUST00000212090 257 ntBASIC4.54□□□□□ -1.68
Hmgb3O54879 AC155834.1-201ENSMUST00000220033 498 ntBASIC4.54□□□□□ -1.68
Hmgb3O54879 AC166105.1-201ENSMUST00000227512 482 ntBASIC4.54□□□□□ -1.68
Hmgb3O54879 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Hmgb3O54879 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Hmgb3O54879 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.54□□□□□ -1.68
Hmgb3O54879 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm44739-201ENSMUST00000205294 1426 ntBASIC4.54□□□□□ -1.68
Hmgb3O54879 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 CT030159.1-201ENSMUST00000221580 2261 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Hmgb3O54879 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC4.53□□□□□ -1.68
Hmgb3O54879 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Hmgb3O54879 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Hmgb3O54879 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm23768-201ENSMUST00000104440 131 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm12281-201ENSMUST00000119536 298 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm11369-201ENSMUST00000120812 318 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm16016-201ENSMUST00000120831 550 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm23069-201ENSMUST00000158240 311 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm44940-201ENSMUST00000206225 1247 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm5735-201ENSMUST00000207053 167 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm19212-201ENSMUST00000216642 862 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 AC133598.3-204ENSMUST00000224260 767 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 CT009527.2-201ENSMUST00000225386 606 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 AV026068-237ENSMUST00000226075 572 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Hmgb3O54879 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Hmgb3O54879 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm24036-201ENSMUST00000082868 156 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm19136-201ENSMUST00000190706 2067 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm37018-201ENSMUST00000192441 3869 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Hmgb3O54879 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.53□□□□□ -1.68
Hmgb3O54879 Gm38277-201ENSMUST00000195172 1367 ntBASIC4.53□□□□□ -1.69
Hmgb3O54879 Gm7919-201ENSMUST00000202043 1389 ntBASIC4.53□□□□□ -1.69
Hmgb3O54879 Gm43164-201ENSMUST00000202529 2128 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm42923-201ENSMUST00000198438 2896 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmgb3O54879 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Hmgb3O54879 CT009734.1-201ENSMUST00000227657 1687 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms