Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm5645-201ENSMUST00000179597 714 ntBASIC7.8□□□□□ -1.16
NpcdF8VQB8 Gm7713-201ENSMUST00000181201 1007 ntBASIC7.8□□□□□ -1.16
NpcdF8VQB8 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Gm27044-201ENSMUST00000183033 796 ntBASIC7.8□□□□□ -1.16
NpcdF8VQB8 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.8□□□□□ -1.16
NpcdF8VQB8 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.8□□□□□ -1.16
NpcdF8VQB8 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NpcdF8VQB8 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.8□□□□□ -1.16
NpcdF8VQB8 Gm35013-201ENSMUST00000197218 832 ntBASIC7.8□□□□□ -1.16
NpcdF8VQB8 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Gm31532-201ENSMUST00000203555 767 ntBASIC7.8□□□□□ -1.16
NpcdF8VQB8 LOC665443-201ENSMUST00000212284 796 ntBASIC7.8□□□□□ -1.16
NpcdF8VQB8 AC110381.1-201ENSMUST00000218987 586 ntBASIC7.8□□□□□ -1.16
NpcdF8VQB8 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Gm9292-201ENSMUST00000222008 710 ntBASIC7.8□□□□□ -1.16
NpcdF8VQB8 AC154838.1-201ENSMUST00000228944 911 ntBASIC7.8□□□□□ -1.16
NpcdF8VQB8 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.8□□□□□ -1.16
NpcdF8VQB8 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.8□□□□□ -1.16
NpcdF8VQB8 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
NpcdF8VQB8 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
NpcdF8VQB8 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NpcdF8VQB8 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC7.8□□□□□ -1.16
NpcdF8VQB8 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
NpcdF8VQB8 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NpcdF8VQB8 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm37959-201ENSMUST00000191700 2897 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm43483-201ENSMUST00000196724 2860 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm25422-201ENSMUST00000104219 129 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm12225-201ENSMUST00000117995 298 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm13265-201ENSMUST00000118090 421 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm12442-201ENSMUST00000118372 338 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm12889-201ENSMUST00000118684 241 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm15233-201ENSMUST00000118747 400 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm13013-201ENSMUST00000119087 523 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm13245-201ENSMUST00000119646 260 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm11746-201ENSMUST00000119843 821 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm11481-201ENSMUST00000120069 255 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm15390-201ENSMUST00000120323 738 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm14979-201ENSMUST00000121561 1035 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm6650-201ENSMUST00000166710 614 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Adgrg4-206ENSMUST00000168724 531 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Mir3062-201ENSMUST00000174986 105 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm26968-201ENSMUST00000182894 481 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm21045-201ENSMUST00000183058 1020 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm27409-201ENSMUST00000184727 80 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm29159-201ENSMUST00000187969 379 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm36935-201ENSMUST00000192526 292 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm37380-201ENSMUST00000193752 397 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm35212-201ENSMUST00000196672 606 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm43489-201ENSMUST00000196810 993 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm44727-201ENSMUST00000204225 451 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Gm45739-201ENSMUST00000213094 388 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NpcdF8VQB8 AC155305.1-201ENSMUST00000222207 319 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 AC154198.1-201ENSMUST00000222839 424 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Vmn1r89-206ENSMUST00000227319 985 ntBASIC7.79□□□□□ -1.16
NpcdF8VQB8 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NpcdF8VQB8 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms