Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a3E9PWQ3 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a3E9PWQ3 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a3E9PWQ3 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a3E9PWQ3 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.44□□□□□ -1.54
Col6a3E9PWQ3 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Col6a3E9PWQ3 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.44□□□□□ -1.54
Col6a3E9PWQ3 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC5.44□□□□□ -1.54
Col6a3E9PWQ3 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a3E9PWQ3 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col6a3E9PWQ3 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm28665-201ENSMUST00000189269 670 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm25139-201ENSMUST00000083247 210 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 AC129208.1-201ENSMUST00000227474 2906 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm14746-201ENSMUST00000120309 741 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Mir6993-201ENSMUST00000184912 65 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm18507-201ENSMUST00000218855 525 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 AC140288.1-201ENSMUST00000226329 503 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm38156-201ENSMUST00000194601 2260 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm22497-201ENSMUST00000104499 131 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm14878-201ENSMUST00000118167 293 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm37511-201ENSMUST00000192901 294 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Gm7990-201ENSMUST00000212126 593 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 AC140785.1-201ENSMUST00000217782 383 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a3E9PWQ3 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm22473-201ENSMUST00000104114 132 ntBASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm13566-201ENSMUST00000117428 1142 ntBASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm37857-201ENSMUST00000191784 1199 ntBASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm7079-201ENSMUST00000119726 171 ntBASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm23816-201ENSMUST00000179617 132 ntBASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm14245-201ENSMUST00000118939 1843 ntBASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Myom1-203ENSMUST00000179759 5308 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm37367-201ENSMUST00000191771 2602 ntBASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm38381-201ENSMUST00000193594 2275 ntBASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm8145-201ENSMUST00000118220 745 ntBASIC5.42□□□□□ -1.54
Col6a3E9PWQ3 Gm25103-201ENSMUST00000122671 318 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms