Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm43606-201ENSMUST00000195938 3556 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm13983-201ENSMUST00000118018 865 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm14883-201ENSMUST00000120179 157 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm23034-201ENSMUST00000158001 147 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm27905-201ENSMUST00000184005 207 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm18727-201ENSMUST00000185981 553 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm18849-201ENSMUST00000189861 560 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm37869-201ENSMUST00000193385 595 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm42753-201ENSMUST00000196718 1268 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm45279-201ENSMUST00000210315 391 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm2961-201ENSMUST00000211074 772 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 AC155270.1-202ENSMUST00000221503 352 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 CT033778.1-201ENSMUST00000224767 767 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm24707-201ENSMUST00000082812 107 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm23238-201ENSMUST00000083007 164 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Mir465-201ENSMUST00000093563 74 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm43363-201ENSMUST00000201590 2647 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.54□□□□□ -1.2
Trim11Q99PQ2 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm3221-201ENSMUST00000164869 440 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm17177-201ENSMUST00000169144 483 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm22392-201ENSMUST00000177971 107 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm24465-201ENSMUST00000178398 107 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm26587-201ENSMUST00000180795 989 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm27186-201ENSMUST00000184223 307 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm29141-201ENSMUST00000190357 882 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm7512-201ENSMUST00000195217 1170 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm9419-201ENSMUST00000200672 567 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm29817-201ENSMUST00000210098 172 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 AC156504.1-201ENSMUST00000214608 157 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 AC154727.1-201ENSMUST00000226537 499 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm24621-201ENSMUST00000082679 140 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm37685-201ENSMUST00000193507 2177 ntBASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
Trim11Q99PQ2 Gm37407-201ENSMUST00000194793 1316 ntBASIC7.52□□□□□ -1.2
Trim11Q99PQ2 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms