Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm29464-201ENSMUST00000187692 513 ntBASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Gm21617-201ENSMUST00000188297 691 ntBASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Gm25617-202ENSMUST00000198387 132 ntBASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Gm42663-201ENSMUST00000199883 351 ntBASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 AC161456.1-201ENSMUST00000206771 887 ntBASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Prl7a1-203ENSMUST00000224852 1283 ntBASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Gm5612-201ENSMUST00000053326 375 ntBASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Gm42548-201ENSMUST00000202669 3933 ntBASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc9Q8VC31 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm15185-201ENSMUST00000117397 746 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm22923-201ENSMUST00000174952 110 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm8609-201ENSMUST00000182967 998 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Mir6348-201ENSMUST00000183804 120 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm27295-201ENSMUST00000184264 153 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm37533-201ENSMUST00000193848 545 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Ighv1-73-201ENSMUST00000197435 352 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm43222-201ENSMUST00000199013 603 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm19212-201ENSMUST00000216642 862 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm4042-201ENSMUST00000216946 637 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 AC161256.1-201ENSMUST00000217312 213 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Zmym2-202ENSMUST00000223669 1281 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm23054-201ENSMUST00000082804 162 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm22581-201ENSMUST00000083735 136 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm44439-201ENSMUST00000203379 3592 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Gm44535-201ENSMUST00000208889 3136 ntBASIC6.94□□□□□ -1.3
Ccdc9Q8VC31 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Gm29112-201ENSMUST00000188962 3487 ntBASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Gm24888-201ENSMUST00000104387 130 ntBASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Gm14531-201ENSMUST00000120845 285 ntBASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Gm12778-201ENSMUST00000122341 333 ntBASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Gm16297-201ENSMUST00000161466 459 ntBASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.93□□□□□ -1.3
Ccdc9Q8VC31 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms