Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Clrn1Q8K445 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC5.99□□□□□ -1.45
Clrn1Q8K445 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Clrn1Q8K445 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Clrn1Q8K445 Gm42630-201ENSMUST00000195908 3448 ntBASIC5.99□□□□□ -1.45
Clrn1Q8K445 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm42989-201ENSMUST00000200646 2306 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm14854-201ENSMUST00000117758 841 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm12225-201ENSMUST00000117995 298 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm14755-201ENSMUST00000118037 384 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm13679-201ENSMUST00000118678 484 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm12565-201ENSMUST00000119004 649 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm22235-201ENSMUST00000157085 110 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm23894-201ENSMUST00000158107 313 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm23343-201ENSMUST00000158964 143 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm23145-201ENSMUST00000178912 79 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm27853-201ENSMUST00000184176 250 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm37809-201ENSMUST00000195050 931 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm19617-201ENSMUST00000202977 308 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm45912-201ENSMUST00000210646 543 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 AL935138.1-201ENSMUST00000215309 196 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 AC132954.2-201ENSMUST00000222400 403 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 AC166830.1-201ENSMUST00000224201 533 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 AC150560.3-201ENSMUST00000227442 455 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 AC132336.1-201ENSMUST00000222844 1740 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.98□□□□□ -1.45
Clrn1Q8K445 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
Clrn1Q8K445 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Clrn1Q8K445 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Clrn1Q8K445 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.97□□□□□ -1.45
Clrn1Q8K445 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Clrn1Q8K445 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC5.97□□□□□ -1.45
Clrn1Q8K445 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Clrn1Q8K445 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Clrn1Q8K445 AC107742.1-201ENSMUST00000227769 1390 ntBASIC5.97□□□□□ -1.45
Clrn1Q8K445 Gm38081-201ENSMUST00000192680 1645 ntBASIC5.97□□□□□ -1.45
Clrn1Q8K445 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Clrn1Q8K445 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Clrn1Q8K445 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Clrn1Q8K445 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Clrn1Q8K445 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Clrn1Q8K445 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.97□□□□□ -1.45
Clrn1Q8K445 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Clrn1Q8K445 Gm15016-201ENSMUST00000117300 720 ntBASIC5.97□□□□□ -1.45
Clrn1Q8K445 Gm11406-201ENSMUST00000117418 484 ntBASIC5.97□□□□□ -1.45
Clrn1Q8K445 Gm13455-201ENSMUST00000118767 517 ntBASIC5.97□□□□□ -1.45
Clrn1Q8K445 Gm8855-201ENSMUST00000118888 878 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms