Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm25099-201ENSMUST00000093716 116 ntBASIC6.73□□□□□ -1.33
Syne4Q8CII8 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Syne4Q8CII8 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Syne4Q8CII8 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Syne4Q8CII8 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Syne4Q8CII8 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Syne4Q8CII8 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
Syne4Q8CII8 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Syne4Q8CII8 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.73□□□□□ -1.33
Syne4Q8CII8 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Syne4Q8CII8 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Syne4Q8CII8 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.73□□□□□ -1.33
Syne4Q8CII8 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Syne4Q8CII8 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.73□□□□□ -1.33
Syne4Q8CII8 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm22710-201ENSMUST00000116892 125 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm15766-201ENSMUST00000118025 813 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm14601-201ENSMUST00000120892 236 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm12752-201ENSMUST00000121657 811 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm4831-201ENSMUST00000174626 594 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Mir6539-201ENSMUST00000183732 110 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm28429-201ENSMUST00000188521 363 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm37341-201ENSMUST00000194680 371 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm43765-201ENSMUST00000196303 893 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm7181-201ENSMUST00000202197 434 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm44219-201ENSMUST00000203005 273 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm44132-201ENSMUST00000205142 151 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm19201-201ENSMUST00000210127 778 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm7042-201ENSMUST00000223027 384 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 CU024892.1-201ENSMUST00000224869 515 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.72□□□□□ -1.33
Syne4Q8CII8 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Syne4Q8CII8 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.71□□□□□ -1.33
Syne4Q8CII8 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Syne4Q8CII8 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Syne4Q8CII8 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Syne4Q8CII8 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.71□□□□□ -1.33
Syne4Q8CII8 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.71□□□□□ -1.33
Syne4Q8CII8 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Syne4Q8CII8 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Syne4Q8CII8 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Syne4Q8CII8 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Syne4Q8CII8 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Syne4Q8CII8 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.71□□□□□ -1.34
Syne4Q8CII8 Gm5754-201ENSMUST00000118774 892 ntBASIC6.71□□□□□ -1.34
Syne4Q8CII8 Gm4910-201ENSMUST00000119605 366 ntBASIC6.71□□□□□ -1.34
Syne4Q8CII8 Gm12074-201ENSMUST00000120189 219 ntBASIC6.71□□□□□ -1.34
Syne4Q8CII8 Gm7670-201ENSMUST00000121272 641 ntBASIC6.71□□□□□ -1.34
Syne4Q8CII8 Gm12685-201ENSMUST00000121702 214 ntBASIC6.71□□□□□ -1.34
Syne4Q8CII8 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC6.71□□□□□ -1.34
Syne4Q8CII8 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC6.71□□□□□ -1.34
Syne4Q8CII8 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.71□□□□□ -1.34
Syne4Q8CII8 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.71□□□□□ -1.34
Syne4Q8CII8 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.71□□□□□ -1.34
Syne4Q8CII8 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.71□□□□□ -1.34
Syne4Q8CII8 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.71□□□□□ -1.34
Syne4Q8CII8 Gm2429-201ENSMUST00000194635 586 ntBASIC6.71□□□□□ -1.34
Syne4Q8CII8 Gm43531-201ENSMUST00000200676 1114 ntBASIC6.71□□□□□ -1.34
Syne4Q8CII8 Gm20074-201ENSMUST00000208144 484 ntBASIC6.71□□□□□ -1.34
Syne4Q8CII8 Gm18193-201ENSMUST00000210017 772 ntBASIC6.71□□□□□ -1.34
Syne4Q8CII8 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.71□□□□□ -1.34
Syne4Q8CII8 Gm18587-201ENSMUST00000213736 841 ntBASIC6.71□□□□□ -1.34
Syne4Q8CII8 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms