Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm25799-201ENSMUST00000082643 107 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm23502-201ENSMUST00000083902 145 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm18508-201ENSMUST00000215790 1642 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 CT025604.1-201ENSMUST00000221111 3436 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm38062-201ENSMUST00000192541 1856 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm45632-201ENSMUST00000211532 1888 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 AC124581.3-201ENSMUST00000224270 1624 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 AC130827.1-201ENSMUST00000220476 3850 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm12099-201ENSMUST00000118660 750 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm14679-201ENSMUST00000121536 722 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm23430-201ENSMUST00000122490 314 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm24687-201ENSMUST00000157758 241 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm24103-201ENSMUST00000174930 77 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm22569-201ENSMUST00000175545 124 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm19560-201ENSMUST00000177510 514 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm27427-201ENSMUST00000185134 193 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Ighv3-2-201ENSMUST00000191842 349 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm42961-201ENSMUST00000202023 181 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 AC154450.1-201ENSMUST00000220911 485 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 AC102139.1-201ENSMUST00000227000 251 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 AC146601.1-201ENSMUST00000227910 905 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 n-R5s161-201ENSMUST00000083728 114 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 AC121870.1-201ENSMUST00000216279 4879 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Gm45179-201ENSMUST00000208452 4337 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 AC167013.5-201ENSMUST00000227597 2947 ntBASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Brf1Q8CFK2 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm37482-201ENSMUST00000194899 2791 ntBASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm22372-201ENSMUST00000104589 136 ntBASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm11852-201ENSMUST00000120806 222 ntBASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm12288-201ENSMUST00000121054 1282 ntBASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm15877-201ENSMUST00000121897 964 ntBASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm24380-201ENSMUST00000122696 324 ntBASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm25432-201ENSMUST00000158284 66 ntBASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm16147-201ENSMUST00000162143 373 ntBASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm20453-201ENSMUST00000173968 226 ntBASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm27653-201ENSMUST00000185037 136 ntBASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm20776-201ENSMUST00000189940 700 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms