Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Gm15754-201ENSMUST00000119191 478 ntBASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Mir7220-201ENSMUST00000183978 60 ntBASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Gm34768-201ENSMUST00000193884 565 ntBASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Gm37102-201ENSMUST00000195740 1105 ntBASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Gm4874-201ENSMUST00000203589 691 ntBASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Gm44539-201ENSMUST00000206010 238 ntBASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Gm45249-201ENSMUST00000211021 348 ntBASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Gm18996-201ENSMUST00000214851 755 ntBASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Gm19186-201ENSMUST00000219922 333 ntBASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Atg4aQ8C9S8 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm15074-201ENSMUST00000117603 936 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm4989-201ENSMUST00000118711 749 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm23211-201ENSMUST00000122717 308 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm25660-201ENSMUST00000158470 104 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm3216-201ENSMUST00000166927 486 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm3141-201ENSMUST00000168726 499 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Mir7211-201ENSMUST00000184071 63 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm37187-201ENSMUST00000193425 341 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm43629-201ENSMUST00000201782 704 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm17988-201ENSMUST00000208796 535 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm6362-201ENSMUST00000217686 836 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm32526-201ENSMUST00000221878 981 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm25133-201ENSMUST00000082647 130 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm37902-201ENSMUST00000192839 1683 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Atg4aQ8C9S8 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 Gm15078-201ENSMUST00000118371 782 ntBASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 Gm22160-201ENSMUST00000158405 328 ntBASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 Gm1972-201ENSMUST00000181606 964 ntBASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Atg4aQ8C9S8 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms