Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm43113-201ENSMUST00000199713 1754 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm12267-201ENSMUST00000121609 761 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm43408-201ENSMUST00000198263 440 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm7042-201ENSMUST00000223027 384 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Gm9006-201ENSMUST00000165520 841 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Gm37421-201ENSMUST00000193088 132 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 AC116724.1-201ENSMUST00000227900 972 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Gm15971-201ENSMUST00000119372 211 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Scarna13-201ENSMUST00000158164 275 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Gm23700-201ENSMUST00000158842 102 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Gm4831-201ENSMUST00000174626 594 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Mir6400-201ENSMUST00000184870 92 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Gm25147-201ENSMUST00000083030 105 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Mir449a-201ENSMUST00000083641 91 ntBASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col6a6Q8C6K9 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms