Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm18205-201ENSMUST00000209215 841 ntBASIC7.97□□□□□ -1.13
Usp47Q8BY87 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Usp47Q8BY87 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp47Q8BY87 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Usp47Q8BY87 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Usp47Q8BY87 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Usp47Q8BY87 Gm45520-201ENSMUST00000210109 2031 ntBASIC7.96□□□□□ -1.13
Usp47Q8BY87 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Usp47Q8BY87 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Usp47Q8BY87 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC7.96□□□□□ -1.14
Usp47Q8BY87 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Usp47Q8BY87 AC158982.1-205ENSMUST00000227339 1876 ntBASIC7.96□□□□□ -1.14
Usp47Q8BY87 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Usp47Q8BY87 Gm6818-201ENSMUST00000190556 2558 ntBASIC7.96□□□□□ -1.14
Usp47Q8BY87 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Usp47Q8BY87 Gm24265-201ENSMUST00000101833 141 ntBASIC7.96□□□□□ -1.14
Usp47Q8BY87 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC7.96□□□□□ -1.14
Usp47Q8BY87 Gm11561-201ENSMUST00000117429 417 ntBASIC7.96□□□□□ -1.14
Usp47Q8BY87 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC7.96□□□□□ -1.14
Usp47Q8BY87 Gm22122-201ENSMUST00000175147 200 ntBASIC7.96□□□□□ -1.14
Usp47Q8BY87 Gm24407-201ENSMUST00000177864 141 ntBASIC7.96□□□□□ -1.14
Usp47Q8BY87 Gm27985-201ENSMUST00000185112 378 ntBASIC7.96□□□□□ -1.14
Usp47Q8BY87 Gm29489-201ENSMUST00000188934 324 ntBASIC7.96□□□□□ -1.14
Usp47Q8BY87 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Usp47Q8BY87 Gm43724-201ENSMUST00000197516 226 ntBASIC7.96□□□□□ -1.14
Usp47Q8BY87 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC7.96□□□□□ -1.14
Usp47Q8BY87 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC7.96□□□□□ -1.14
Usp47Q8BY87 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
Usp47Q8BY87 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC7.96□□□□□ -1.14
Usp47Q8BY87 AC134860.4-201ENSMUST00000223592 978 ntBASIC7.96□□□□□ -1.14
Usp47Q8BY87 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Usp47Q8BY87 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Usp47Q8BY87 Mir337-201ENSMUST00000083592 97 ntBASIC7.96□□□□□ -1.14
Usp47Q8BY87 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Usp47Q8BY87 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Usp47Q8BY87 AC112972.2-201ENSMUST00000228702 2210 ntBASIC7.95□□□□□ -1.14
Usp47Q8BY87 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Gm43469-201ENSMUST00000196084 4634 ntBASIC7.95□□□□□ -1.14
Usp47Q8BY87 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Mir546-201ENSMUST00000102105 121 ntBASIC7.95□□□□□ -1.14
Usp47Q8BY87 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Gm14874-201ENSMUST00000118995 438 ntBASIC7.95□□□□□ -1.14
Usp47Q8BY87 Gm14871-201ENSMUST00000119056 194 ntBASIC7.95□□□□□ -1.14
Usp47Q8BY87 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Gm22596-201ENSMUST00000157601 316 ntBASIC7.95□□□□□ -1.14
Usp47Q8BY87 Gm24236-201ENSMUST00000157794 134 ntBASIC7.95□□□□□ -1.14
Usp47Q8BY87 Gm24216-201ENSMUST00000158259 117 ntBASIC7.95□□□□□ -1.14
Usp47Q8BY87 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Gm27148-201ENSMUST00000185086 160 ntBASIC7.95□□□□□ -1.14
Usp47Q8BY87 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Gm29755-201ENSMUST00000196976 948 ntBASIC7.95□□□□□ -1.14
Usp47Q8BY87 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Usp47Q8BY87 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Gm18541-201ENSMUST00000215935 538 ntBASIC7.95□□□□□ -1.14
Usp47Q8BY87 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp47Q8BY87 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Usp47Q8BY87 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp47Q8BY87 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC7.94□□□□□ -1.14
Usp47Q8BY87 Gm37435-201ENSMUST00000192078 3947 ntBASIC7.94□□□□□ -1.14
Usp47Q8BY87 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp47Q8BY87 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC7.94□□□□□ -1.14
Usp47Q8BY87 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Usp47Q8BY87 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp47Q8BY87 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp47Q8BY87 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp47Q8BY87 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp47Q8BY87 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp47Q8BY87 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp47Q8BY87 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp47Q8BY87 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp47Q8BY87 Gm13579-201ENSMUST00000118519 517 ntBASIC7.94□□□□□ -1.14
Usp47Q8BY87 Gm14267-201ENSMUST00000119751 496 ntBASIC7.94□□□□□ -1.14
Usp47Q8BY87 Gm11825-201ENSMUST00000120710 736 ntBASIC7.94□□□□□ -1.14
Usp47Q8BY87 Gm23883-201ENSMUST00000122686 290 ntBASIC7.94□□□□□ -1.14
Usp47Q8BY87 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Usp47Q8BY87 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Usp47Q8BY87 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC7.94□□□□□ -1.14
Usp47Q8BY87 Gm6872-201ENSMUST00000165001 700 ntBASIC7.94□□□□□ -1.14
Usp47Q8BY87 Gm22569-201ENSMUST00000175545 124 ntBASIC7.94□□□□□ -1.14
Usp47Q8BY87 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Usp47Q8BY87 Gm29376-201ENSMUST00000189357 835 ntBASIC7.94□□□□□ -1.14
Usp47Q8BY87 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC7.94□□□□□ -1.14
Usp47Q8BY87 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC7.94□□□□□ -1.14
Usp47Q8BY87 AC154323.1-201ENSMUST00000228329 1231 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms