Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm12077-201ENSMUST00000117049 364 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm15237-201ENSMUST00000122104 469 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm21542-201ENSMUST00000182307 993 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm6631-201ENSMUST00000193699 559 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm35013-201ENSMUST00000197218 832 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm44382-201ENSMUST00000198683 122 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm7181-201ENSMUST00000202197 434 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm44607-201ENSMUST00000205611 1090 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm45008-201ENSMUST00000206420 493 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 AC158511.1-201ENSMUST00000223622 764 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm45149-201ENSMUST00000206459 2172 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Gm23311-201ENSMUST00000104152 134 ntBASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Gm14842-201ENSMUST00000119577 269 ntBASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Gm22223-201ENSMUST00000157360 125 ntBASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Gm29663-201ENSMUST00000186962 853 ntBASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Gm37189-201ENSMUST00000192131 298 ntBASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Gm3351-201ENSMUST00000193454 505 ntBASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Gm37341-201ENSMUST00000194680 371 ntBASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Gm42452-201ENSMUST00000199749 617 ntBASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Gm9088-201ENSMUST00000220237 508 ntBASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.07□□□□□ -1.44
Ccdc40Q8BI79 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms