Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm10936-201ENSMUST00000105264 252 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm14938-201ENSMUST00000119482 943 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm24719-201ENSMUST00000157520 110 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm18199-201ENSMUST00000173820 835 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Mir7674-201ENSMUST00000184964 63 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm8920-201ENSMUST00000196153 924 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm4032-201ENSMUST00000210886 487 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm18255-201ENSMUST00000211316 765 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm45733-201ENSMUST00000212988 437 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Trafd1Q3UDK1 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm11848-201ENSMUST00000121207 973 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm15959-201ENSMUST00000121724 368 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm26069-201ENSMUST00000157497 277 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm20401-201ENSMUST00000173717 212 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Vis1-201ENSMUST00000183957 201 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Mir7037-201ENSMUST00000184414 65 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm37187-201ENSMUST00000193425 341 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm42646-201ENSMUST00000202233 914 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm44768-201ENSMUST00000205719 393 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm45850-201ENSMUST00000212536 338 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm8137-201ENSMUST00000218997 463 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm7042-201ENSMUST00000223027 384 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm23737-201ENSMUST00000082547 159 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Zfp850-201ENSMUST00000099111 941 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.67□□□□□ -1.5
Trafd1Q3UDK1 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trafd1Q3UDK1 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms