Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm17101-201ENSMUST00000169520 1588 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm18359-201ENSMUST00000173024 1459 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm25346-201ENSMUST00000104509 128 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm14893-201ENSMUST00000117904 282 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm12770-201ENSMUST00000121734 462 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm25839-201ENSMUST00000158921 103 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm5456-201ENSMUST00000170706 844 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Mir3090-201ENSMUST00000175597 87 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm6472-201ENSMUST00000178147 651 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm17045-201ENSMUST00000178600 844 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
Col8a1Q00780 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm18357-201ENSMUST00000188184 580 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm37399-201ENSMUST00000195224 416 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm29745-201ENSMUST00000198005 687 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm43725-201ENSMUST00000200122 369 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.73□□□□□ -1.49
Col8a1Q00780 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm6056-201ENSMUST00000221253 488 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 AC126554.3-201ENSMUST00000223131 493 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 AC119573.1-201ENSMUST00000227960 757 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm7099-201ENSMUST00000080066 554 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 n-R5s97-201ENSMUST00000082585 113 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm23378-201ENSMUST00000082942 107 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm24924-201ENSMUST00000084007 164 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col8a1Q00780 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col8a1Q00780 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm37407-201ENSMUST00000194793 1316 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm18313-201ENSMUST00000221036 1784 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC5.72□□□□□ -1.49
Col8a1Q00780 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
Col8a1Q00780 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm44194-201ENSMUST00000204222 3229 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm12294-201ENSMUST00000119723 490 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm12067-201ENSMUST00000119755 1148 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm13462-201ENSMUST00000121472 961 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm3810-201ENSMUST00000122413 476 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC5.72□□□□□ -1.49
Col8a1Q00780 Snora47-201ENSMUST00000157483 138 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm26162-201ENSMUST00000157793 132 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm23082-201ENSMUST00000157852 133 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm23034-201ENSMUST00000158001 147 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm22262-201ENSMUST00000158713 86 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm17366-201ENSMUST00000167629 187 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm20432-201ENSMUST00000173716 250 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.72□□□□□ -1.49
Col8a1Q00780 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm26729-201ENSMUST00000180744 352 ntBASIC5.72□□□□□ -1.49
Col8a1Q00780 Gm26509-201ENSMUST00000180947 948 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms