Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm14382-201ENSMUST00000117374 437 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm13473-201ENSMUST00000119289 367 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm14679-201ENSMUST00000121536 722 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm17142-201ENSMUST00000164933 645 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm4617-201ENSMUST00000178993 331 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm27985-201ENSMUST00000185112 378 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm43516-201ENSMUST00000196891 322 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm45525-201ENSMUST00000210800 389 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm8523-201ENSMUST00000211386 552 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Gm4989-201ENSMUST00000118711 749 ntBASIC5.01□□□□□ -1.61
Nkx3-1P97436 Gm11804-201ENSMUST00000121663 468 ntBASIC5.01□□□□□ -1.61
Nkx3-1P97436 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Gm26086-201ENSMUST00000157902 263 ntBASIC5.01□□□□□ -1.61
Nkx3-1P97436 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Gm17121-201ENSMUST00000170414 847 ntBASIC5.01□□□□□ -1.61
Nkx3-1P97436 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.01□□□□□ -1.61
Nkx3-1P97436 Gm17222-201ENSMUST00000180135 847 ntBASIC5.01□□□□□ -1.61
Nkx3-1P97436 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Gm29201-201ENSMUST00000189120 431 ntBASIC5.01□□□□□ -1.61
Nkx3-1P97436 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Gm42522-201ENSMUST00000196071 255 ntBASIC5.01□□□□□ -1.61
Nkx3-1P97436 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.01□□□□□ -1.61
Nkx3-1P97436 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.01□□□□□ -1.61
Nkx3-1P97436 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.01□□□□□ -1.61
Nkx3-1P97436 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.01□□□□□ -1.61
Nkx3-1P97436 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Gm42930-201ENSMUST00000200872 3260 ntBASIC5.01□□□□□ -1.61
Nkx3-1P97436 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx3-1P97436 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms