Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm8891-201ENSMUST00000198546 832 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC3.77□□□□□ -1.81
PrkdcP97313 AC153971.1-201ENSMUST00000215097 3811 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 AC137117.1-201ENSMUST00000226912 441 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm45084-201ENSMUST00000207096 1957 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm43961-201ENSMUST00000203289 1872 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC3.77□□□□□ -1.81
PrkdcP97313 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 CT009480.3-201ENSMUST00000224051 3032 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PrkdcP97313 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC3.77□□□□□ -1.81
PrkdcP97313 Mir761-201ENSMUST00000103245 76 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Gm25418-201ENSMUST00000104214 129 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Gm24359-201ENSMUST00000158418 221 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC3.77□□□□□ -1.81
PrkdcP97313 AC154576.2-203ENSMUST00000224736 253 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC3.77□□□□□ -1.81
PrkdcP97313 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm38096-201ENSMUST00000193692 2389 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Gm44440-201ENSMUST00000203139 2373 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
PrkdcP97313 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PrkdcP97313 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm11822-201ENSMUST00000119177 415 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm23906-201ENSMUST00000157573 128 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Gm23082-201ENSMUST00000157852 133 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Gm24767-201ENSMUST00000158509 95 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Mir6414-201ENSMUST00000183685 82 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.77□□□□□ -1.81
PrkdcP97313 AC102291.1-201ENSMUST00000227164 529 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm23508-201ENSMUST00000083079 72 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PrkdcP97313 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PrkdcP97313 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC3.77□□□□□ -1.81
PrkdcP97313 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC3.77□□□□□ -1.81
PrkdcP97313 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PrkdcP97313 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
PrkdcP97313 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC3.77□□□□□ -1.81
PrkdcP97313 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PrkdcP97313 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PrkdcP97313 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC3.76□□□□□ -1.81
PrkdcP97313 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PrkdcP97313 Gm37088-201ENSMUST00000193887 406 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC3.76□□□□□ -1.81
PrkdcP97313 Gm3816-201ENSMUST00000209803 433 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PrkdcP97313 CT009765.2-201ENSMUST00000221331 392 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PrkdcP97313 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PrkdcP97313 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PrkdcP97313 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
PrkdcP97313 AC165260.6-204ENSMUST00000225571 3508 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PrkdcP97313 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PrkdcP97313 Gm43360-201ENSMUST00000197656 2887 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PrkdcP97313 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PrkdcP97313 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PrkdcP97313 Gm5511-201ENSMUST00000189380 802 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PrkdcP97313 Gm44038-201ENSMUST00000203952 889 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PrkdcP97313 AC168881.1-201ENSMUST00000226018 430 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 Gm5215-201ENSMUST00000054380 405 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PrkdcP97313 Gm44022-201ENSMUST00000203708 5429 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 AC122305.1-201ENSMUST00000214803 3921 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PrkdcP97313 AC154642.2-201ENSMUST00000223657 2485 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PrkdcP97313 AC153729.1-201ENSMUST00000214055 2562 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 Gm45191-201ENSMUST00000205846 5439 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
PrkdcP97313 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
PrkdcP97313 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PrkdcP97313 Gm22710-201ENSMUST00000116892 125 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 Gm14037-201ENSMUST00000120576 313 ntBASIC3.76□□□□□ -1.81
PrkdcP97313 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PrkdcP97313 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms