Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm14238-201ENSMUST00000120227 323 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm26159-201ENSMUST00000158968 104 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm28094-201ENSMUST00000185262 390 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm8101-201ENSMUST00000192796 478 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm18428-201ENSMUST00000194986 791 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm20690-202ENSMUST00000195126 355 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm3933-201ENSMUST00000195391 439 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm42818-201ENSMUST00000198869 987 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm42883-201ENSMUST00000202594 222 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm5314-201ENSMUST00000204852 466 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm45157-201ENSMUST00000208729 401 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm18557-201ENSMUST00000218710 433 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.04□□□□□ -1.44
Sf3b6P59708 AC102603.1-201ENSMUST00000227481 584 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3b6P59708 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm20900-201ENSMUST00000078729 472 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3b6P59708 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3b6P59708 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm37311-201ENSMUST00000195541 2024 ntBASIC6.04□□□□□ -1.44
Sf3b6P59708 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3b6P59708 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sf3b6P59708 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3b6P59708 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3b6P59708 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3b6P59708 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sf3b6P59708 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3b6P59708 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sf3b6P59708 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm37877-201ENSMUST00000191630 2709 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm45872-201ENSMUST00000209804 1584 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm25083-201ENSMUST00000102319 92 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm22591-201ENSMUST00000104243 106 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm22072-201ENSMUST00000116850 121 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm7700-201ENSMUST00000120273 970 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm13574-201ENSMUST00000120482 394 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm9697-201ENSMUST00000147052 997 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm24065-201ENSMUST00000157487 264 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm24782-201ENSMUST00000157641 132 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm7418-201ENSMUST00000162120 801 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Sf3b6P59708 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm9457-201ENSMUST00000180176 372 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm16531-201ENSMUST00000180658 967 ntBASIC6.03□□□□□ -1.44
Sf3b6P59708 Gm1972-201ENSMUST00000181606 964 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 109.7 ms