Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm25537-201ENSMUST00000103851 109 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Gm22272-201ENSMUST00000104039 134 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Sox3P53784 Gm8545-201ENSMUST00000120692 801 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Gm13593-201ENSMUST00000121329 692 ntBASIC5.57□□□□□ -1.52
Sox3P53784 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sox3P53784 Gm23546-201ENSMUST00000158211 137 ntBASIC5.57□□□□□ -1.52
Sox3P53784 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.57□□□□□ -1.52
Sox3P53784 Gm8032-201ENSMUST00000171009 574 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Mir5103-201ENSMUST00000175111 79 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox3P53784 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.57□□□□□ -1.52
Sox3P53784 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5.57□□□□□ -1.52
Sox3P53784 Gm27887-201ENSMUST00000184367 102 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.57□□□□□ -1.52
Sox3P53784 Gm28976-201ENSMUST00000188070 144 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Gm29376-201ENSMUST00000189357 835 ntBASIC5.57□□□□□ -1.52
Sox3P53784 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sox3P53784 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Gm43744-201ENSMUST00000196387 688 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Gm19065-202ENSMUST00000203910 1165 ntBASIC5.57□□□□□ -1.52
Sox3P53784 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sox3P53784 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Gm18591-201ENSMUST00000220568 763 ntBASIC5.57□□□□□ -1.52
Sox3P53784 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sox3P53784 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.57□□□□□ -1.52
Sox3P53784 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.57□□□□□ -1.52
Sox3P53784 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox3P53784 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Sox3P53784 Gm17165-201ENSMUST00000096155 493 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Sox3P53784 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.57□□□□□ -1.52
Sox3P53784 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sox3P53784 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sox3P53784 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sox3P53784 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.57□□□□□ -1.52
Sox3P53784 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Sox3P53784 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox3P53784 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox3P53784 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sox3P53784 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sox3P53784 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.56□□□□□ -1.52
Sox3P53784 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
Sox3P53784 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Sox3P53784 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.56□□□□□ -1.52
Sox3P53784 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Sox3P53784 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Sox3P53784 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox3P53784 Gm25415-201ENSMUST00000104220 132 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Gm25564-201ENSMUST00000104604 132 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Gm13033-201ENSMUST00000117591 1057 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Gm12287-201ENSMUST00000119770 707 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Gm7670-201ENSMUST00000121272 641 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.56□□□□□ -1.52
Sox3P53784 Gm16060-201ENSMUST00000153140 478 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.56□□□□□ -1.52
Sox3P53784 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.56□□□□□ -1.52
Sox3P53784 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC5.56□□□□□ -1.52
Sox3P53784 Gm28385-201ENSMUST00000185671 292 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Gm9332-201ENSMUST00000198431 730 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.56□□□□□ -1.52
Sox3P53784 Gm8039-201ENSMUST00000204758 712 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.56□□□□□ -1.52
Sox3P53784 Gm18413-201ENSMUST00000221573 655 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sox3P53784 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sox3P53784 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Sox3P53784 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sox3P53784 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sox3P53784 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Sox3P53784 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Sox3P53784 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox3P53784 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox3P53784 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sox3P53784 AC158595.1-201ENSMUST00000217989 1435 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.56□□□□□ -1.52
Sox3P53784 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Sox3P53784 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox3P53784 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox3P53784 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Sox3P53784 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox3P53784 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Sox3P53784 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox3P53784 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sox3P53784 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms