Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Cux1P53564 Gm13928-201ENSMUST00000120326 1732 ntBASIC8.69□□□□□ -1.02
Cux1P53564 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cux1P53564 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC8.69□□□□□ -1.02
Cux1P53564 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC8.69□□□□□ -1.02
Cux1P53564 Gm25389-201ENSMUST00000157340 286 ntBASIC8.69□□□□□ -1.02
Cux1P53564 Mir1945-201ENSMUST00000157919 78 ntBASIC8.69□□□□□ -1.02
Cux1P53564 Gm10319-202ENSMUST00000159439 846 ntBASIC8.69□□□□□ -1.02
Cux1P53564 Gm15812-201ENSMUST00000162331 748 ntBASIC8.69□□□□□ -1.02
Cux1P53564 Gm25019-201ENSMUST00000179732 110 ntBASIC8.69□□□□□ -1.02
Cux1P53564 Gm5334-201ENSMUST00000187472 720 ntBASIC8.69□□□□□ -1.02
Cux1P53564 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cux1P53564 AC153870.1-201ENSMUST00000219599 560 ntBASIC8.69□□□□□ -1.02
Cux1P53564 AC211878.2-201ENSMUST00000222486 488 ntBASIC8.69□□□□□ -1.02
Cux1P53564 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Cux1P53564 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cux1P53564 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cux1P53564 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cux1P53564 Gm37943-201ENSMUST00000194053 3944 ntBASIC8.69□□□□□ -1.02
Cux1P53564 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cux1P53564 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cux1P53564 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Cux1P53564 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cux1P53564 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cux1P53564 Gm43175-201ENSMUST00000198450 3810 ntBASIC8.68□□□□□ -1.02
Cux1P53564 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Cux1P53564 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
Cux1P53564 Gm5844-201ENSMUST00000119417 2191 ntBASIC8.68□□□□□ -1.02
Cux1P53564 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Cux1P53564 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Cux1P53564 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC8.68□□□□□ -1.02
Cux1P53564 Mir7056-201ENSMUST00000183776 59 ntBASIC8.68□□□□□ -1.02
Cux1P53564 Gm44108-201ENSMUST00000203525 422 ntBASIC8.68□□□□□ -1.02
Cux1P53564 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
Cux1P53564 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Cux1P53564 AC134860.4-201ENSMUST00000223592 978 ntBASIC8.68□□□□□ -1.02
Cux1P53564 AC131033.2-201ENSMUST00000228138 1011 ntBASIC8.68□□□□□ -1.02
Cux1P53564 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Cux1P53564 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Cux1P53564 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Cux1P53564 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Cux1P53564 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cux1P53564 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cux1P53564 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cux1P53564 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cux1P53564 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Cux1P53564 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cux1P53564 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cux1P53564 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Cux1P53564 Gm15238-201ENSMUST00000119938 1296 ntBASIC8.67□□□□□ -1.02
Cux1P53564 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC8.67□□□□□ -1.02
Cux1P53564 Gm23883-201ENSMUST00000122686 290 ntBASIC8.67□□□□□ -1.02
Cux1P53564 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC8.67□□□□□ -1.02
Cux1P53564 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cux1P53564 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Cux1P53564 Gm18717-201ENSMUST00000192744 1241 ntBASIC8.67□□□□□ -1.02
Cux1P53564 Gm43444-201ENSMUST00000198123 291 ntBASIC8.67□□□□□ -1.02
Cux1P53564 Gm18924-201ENSMUST00000211929 316 ntBASIC8.67□□□□□ -1.02
Cux1P53564 AC154450.1-201ENSMUST00000220911 485 ntBASIC8.67□□□□□ -1.02
Cux1P53564 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC8.67□□□□□ -1.02
Cux1P53564 AC132317.2-201ENSMUST00000227301 519 ntBASIC8.67□□□□□ -1.02
Cux1P53564 Mir31-201ENSMUST00000083474 106 ntBASIC8.67□□□□□ -1.02
Cux1P53564 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cux1P53564 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Cux1P53564 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cux1P53564 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cux1P53564 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cux1P53564 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cux1P53564 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cux1P53564 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cux1P53564 Gm44193-201ENSMUST00000204822 2523 ntBASIC8.67□□□□□ -1.02
Cux1P53564 Gm38377-201ENSMUST00000193253 3772 ntBASIC8.67□□□□□ -1.02
Cux1P53564 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cux1P53564 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cux1P53564 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cux1P53564 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC8.66□□□□□ -1.02
Cux1P53564 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC8.66□□□□□ -1.02
Cux1P53564 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC8.66□□□□□ -1.02
Cux1P53564 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC8.66□□□□□ -1.02
Cux1P53564 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cux1P53564 AC155808.1-201ENSMUST00000219288 409 ntBASIC8.66□□□□□ -1.02
Cux1P53564 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC8.66□□□□□ -1.02
Cux1P53564 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Cux1P53564 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Cux1P53564 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Cux1P53564 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cux1P53564 Gm43130-201ENSMUST00000197721 3907 ntBASIC8.66□□□□□ -1.02
Cux1P53564 Gm9239-201ENSMUST00000186942 2557 ntBASIC8.66□□□□□ -1.02
Cux1P53564 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
Cux1P53564 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC8.66□□□□□ -1.02
Cux1P53564 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Cux1P53564 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cux1P53564 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC8.66□□□□□ -1.02
Cux1P53564 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cux1P53564 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC8.66□□□□□ -1.02
Cux1P53564 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Cux1P53564 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cux1P53564 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cux1P53564 Gm38276-201ENSMUST00000192446 1343 ntBASIC8.66□□□□□ -1.02
Cux1P53564 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms