Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.37□□□□□ -1.55
Sox6P40645 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.37□□□□□ -1.55
Sox6P40645 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.37□□□□□ -1.55
Sox6P40645 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.37□□□□□ -1.55
Sox6P40645 Gm44312-201ENSMUST00000203536 469 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Sox6P40645 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.37□□□□□ -1.55
Sox6P40645 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.37□□□□□ -1.55
Sox6P40645 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.37□□□□□ -1.55
Sox6P40645 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Cma2-202ENSMUST00000228263 857 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
Sox6P40645 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Sox6P40645 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.37□□□□□ -1.55
Sox6P40645 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sox6P40645 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Sox6P40645 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.37□□□□□ -1.55
Sox6P40645 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.37□□□□□ -1.55
Sox6P40645 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox6P40645 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.36□□□□□ -1.55
Sox6P40645 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox6P40645 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox6P40645 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Sox6P40645 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Sox6P40645 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Sox6P40645 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.36□□□□□ -1.55
Sox6P40645 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox6P40645 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sox6P40645 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sox6P40645 Gm24434-201ENSMUST00000104081 132 ntBASIC5.36□□□□□ -1.55
Sox6P40645 Gm7931-201ENSMUST00000121537 271 ntBASIC5.36□□□□□ -1.55
Sox6P40645 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.36□□□□□ -1.55
Sox6P40645 Gm8032-201ENSMUST00000171009 574 ntBASIC5.36□□□□□ -1.55
Sox6P40645 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
Sox6P40645 Gm7952-201ENSMUST00000180540 984 ntBASIC5.36□□□□□ -1.55
Sox6P40645 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox6P40645 Gm27004-201ENSMUST00000183300 727 ntBASIC5.36□□□□□ -1.55
Sox6P40645 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox6P40645 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.36□□□□□ -1.55
Sox6P40645 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox6P40645 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox6P40645 Gm43105-201ENSMUST00000202987 459 ntBASIC5.36□□□□□ -1.55
Sox6P40645 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox6P40645 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox6P40645 Gm8137-201ENSMUST00000218997 463 ntBASIC5.36□□□□□ -1.55
Sox6P40645 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox6P40645 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox6P40645 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox6P40645 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.36□□□□□ -1.55
Sox6P40645 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Sox6P40645 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.36□□□□□ -1.55
Sox6P40645 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox6P40645 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Sox6P40645 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sox6P40645 Gm6104-201ENSMUST00000078030 603 ntBASIC5.36□□□□□ -1.55
Sox6P40645 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sox6P40645 Gm17165-201ENSMUST00000096155 493 ntBASIC5.36□□□□□ -1.55
Sox6P40645 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sox6P40645 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.36□□□□□ -1.55
Sox6P40645 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox6P40645 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox6P40645 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox6P40645 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox6P40645 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox6P40645 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Sox6P40645 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Sox6P40645 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sox6P40645 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox6P40645 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox6P40645 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Sox6P40645 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.35□□□□□ -1.55
Sox6P40645 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox6P40645 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sox6P40645 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Sox6P40645 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.35□□□□□ -1.55
Sox6P40645 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.35□□□□□ -1.55
Sox6P40645 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.35□□□□□ -1.55
Sox6P40645 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Sox6P40645 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Sox6P40645 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.35□□□□□ -1.55
Sox6P40645 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox6P40645 Gm23440-201ENSMUST00000104299 130 ntBASIC5.35□□□□□ -1.55
Sox6P40645 Gm12077-201ENSMUST00000117049 364 ntBASIC5.35□□□□□ -1.55
Sox6P40645 Gm13770-201ENSMUST00000117149 305 ntBASIC5.35□□□□□ -1.55
Sox6P40645 Gm12099-201ENSMUST00000118660 750 ntBASIC5.35□□□□□ -1.55
Sox6P40645 Gm16016-201ENSMUST00000120831 550 ntBASIC5.35□□□□□ -1.55
Sox6P40645 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Sox6P40645 Gm17137-202ENSMUST00000165729 957 ntBASIC5.35□□□□□ -1.55
Sox6P40645 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sox6P40645 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms